Gene : AT2G28390 A. thaliana TAIR10
Defline:  (1 of 1) KOG0997 - Uncharacterized conserved protein Sand Genomic Order:  2125
Name:  ? AT2G28390 Secondary Identifier:  ? PAC:19642335
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28390 0.5kb upstream 0.5kb upstream 4386 true Chr2: 12139580-12143965 Arabidopsis thaliana
AT2G28390 0.5kb upstream 0.5kb upstream 500 false Chr2: 12143466-12143965 Arabidopsis thaliana
AT2G28390 0.5kb downstream 0.5kb downstream 4386 true Chr2: 12139080-12143465 Arabidopsis thaliana
AT2G28390 0.5kb downstream 0.5kb downstream 500 false Chr2: 12139080-12139579 Arabidopsis thaliana
AT2G28390 1.0kb upstream 1.0kb upstream 4886 true Chr2: 12139580-12144465 Arabidopsis thaliana
AT2G28390 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12143466-12144465 Arabidopsis thaliana
AT2G28390 1.0kb downstream 1.0kb downstream 4886 true Chr2: 12138580-12143465 Arabidopsis thaliana
AT2G28390 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12138580-12139579 Arabidopsis thaliana
AT2G28390 2.0kb upstream 2.0kb upstream 5886 true Chr2: 12139580-12145465 Arabidopsis thaliana
AT2G28390 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12143466-12145465 Arabidopsis thaliana
AT2G28390 2.0kb downstream 2.0kb downstream 5886 true Chr2: 12137580-12143465 Arabidopsis thaliana
AT2G28390 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12137580-12139579 Arabidopsis thaliana
AT2G28390 5.0kb upstream 5.0kb upstream 8886 true Chr2: 12139580-12148465 Arabidopsis thaliana
AT2G28390 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12143466-12148465 Arabidopsis thaliana
AT2G28390 5.0kb downstream 5.0kb downstream 8886 true Chr2: 12134580-12143465 Arabidopsis thaliana
AT2G28390 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12134580-12139579 Arabidopsis thaliana
AT2G28390 10.0kb upstream 10.0kb upstream 13886 true Chr2: 12139580-12153465 Arabidopsis thaliana
AT2G28390 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12143466-12153465 Arabidopsis thaliana
AT2G28390 10.0kb downstream 10.0kb downstream 13886 true Chr2: 12129580-12143465 Arabidopsis thaliana
AT2G28390 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12129580-12139579 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366891 5261 Brassicaceae View MSA
123837637 5264 Brassicales-Malvales View MSA
124339885 5266 SBM View MSA
124244179 5268 Malvidae View MSA
124066322 5270 Rosid View MSA
123753489 5271 Pentapetalae View MSA
122789295 5272 Eudicot View MSA
122043673 5273 Angiosperm View MSA
121344284 5274 Embryophyte View MSA
123428228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.806       Low
cufflinks 12.792        
cufflinks 11.057        
cufflinks 13.001        
cufflinks 10.926        
cufflinks 13.093       High

0 Strain