Gene : AT2G27930 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2076
Name:  ? AT2G27930 Secondary Identifier:  ? PAC:19638744
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27930 0.5kb upstream 0.5kb upstream 1620 true Chr2: 11891869-11893488 Arabidopsis thaliana
AT2G27930 0.5kb upstream 0.5kb upstream 500 false Chr2: 11891869-11892368 Arabidopsis thaliana
AT2G27930 0.5kb downstream 0.5kb downstream 1620 true Chr2: 11892369-11893988 Arabidopsis thaliana
AT2G27930 0.5kb downstream 0.5kb downstream 500 false Chr2: 11893489-11893988 Arabidopsis thaliana
AT2G27930 1.0kb upstream 1.0kb upstream 2120 true Chr2: 11891369-11893488 Arabidopsis thaliana
AT2G27930 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11891369-11892368 Arabidopsis thaliana
AT2G27930 1.0kb downstream 1.0kb downstream 2120 true Chr2: 11892369-11894488 Arabidopsis thaliana
AT2G27930 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11893489-11894488 Arabidopsis thaliana
AT2G27930 2.0kb upstream 2.0kb upstream 3120 true Chr2: 11890369-11893488 Arabidopsis thaliana
AT2G27930 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11890369-11892368 Arabidopsis thaliana
AT2G27930 2.0kb downstream 2.0kb downstream 3120 true Chr2: 11892369-11895488 Arabidopsis thaliana
AT2G27930 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11893489-11895488 Arabidopsis thaliana
AT2G27930 5.0kb upstream 5.0kb upstream 6120 true Chr2: 11887369-11893488 Arabidopsis thaliana
AT2G27930 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11887369-11892368 Arabidopsis thaliana
AT2G27930 5.0kb downstream 5.0kb downstream 6120 true Chr2: 11892369-11898488 Arabidopsis thaliana
AT2G27930 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11893489-11898488 Arabidopsis thaliana
AT2G27930 10.0kb upstream 10.0kb upstream 11120 true Chr2: 11882369-11893488 Arabidopsis thaliana
AT2G27930 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11882369-11892368 Arabidopsis thaliana
AT2G27930 10.0kb downstream 10.0kb downstream 11120 true Chr2: 11892369-11903488 Arabidopsis thaliana
AT2G27930 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11893489-11903488 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378350 5261 Brassicaceae View MSA
123838046 5264 Brassicales-Malvales View MSA
124345937 5266 SBM View MSA
124248577 5268 Malvidae View MSA
124069280 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.268     Low  
cufflinks 2.232        
cufflinks 0.323        
cufflinks 2.077        
cufflinks 0.286        
cufflinks 2.685       High

0 Strain