Gene : AT2G27740 A. thaliana TAIR10
Defline:  (1 of 7) PF04949 - Transcriptional activator (Transcrip_act) Genomic Order:  2060
Name:  ? AT2G27740 Secondary Identifier:  ? PAC:19641952
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27740 0.5kb upstream 0.5kb upstream 1501 true Chr2: 11822232-11823732 Arabidopsis thaliana
AT2G27740 0.5kb upstream 0.5kb upstream 500 false Chr2: 11822232-11822731 Arabidopsis thaliana
AT2G27740 0.5kb downstream 0.5kb downstream 1501 true Chr2: 11822732-11824232 Arabidopsis thaliana
AT2G27740 0.5kb downstream 0.5kb downstream 500 false Chr2: 11823733-11824232 Arabidopsis thaliana
AT2G27740 1.0kb upstream 1.0kb upstream 2001 true Chr2: 11821732-11823732 Arabidopsis thaliana
AT2G27740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11821732-11822731 Arabidopsis thaliana
AT2G27740 1.0kb downstream 1.0kb downstream 2001 true Chr2: 11822732-11824732 Arabidopsis thaliana
AT2G27740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11823733-11824732 Arabidopsis thaliana
AT2G27740 2.0kb upstream 2.0kb upstream 3001 true Chr2: 11820732-11823732 Arabidopsis thaliana
AT2G27740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11820732-11822731 Arabidopsis thaliana
AT2G27740 2.0kb downstream 2.0kb downstream 3001 true Chr2: 11822732-11825732 Arabidopsis thaliana
AT2G27740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11823733-11825732 Arabidopsis thaliana
AT2G27740 5.0kb upstream 5.0kb upstream 6001 true Chr2: 11817732-11823732 Arabidopsis thaliana
AT2G27740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11817732-11822731 Arabidopsis thaliana
AT2G27740 5.0kb downstream 5.0kb downstream 6001 true Chr2: 11822732-11828732 Arabidopsis thaliana
AT2G27740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11823733-11828732 Arabidopsis thaliana
AT2G27740 10.0kb upstream 10.0kb upstream 11001 true Chr2: 11812732-11823732 Arabidopsis thaliana
AT2G27740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11812732-11822731 Arabidopsis thaliana
AT2G27740 10.0kb downstream 10.0kb downstream 11001 true Chr2: 11822732-11833732 Arabidopsis thaliana
AT2G27740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11823733-11833732 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376011 5261 Brassicaceae View MSA
123838329 5264 Brassicales-Malvales View MSA
124341268 5266 SBM View MSA
124237329 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.286        
cufflinks 8.103        
cufflinks 1.821        
cufflinks 8.162        
cufflinks 1.157       Low
cufflinks 10.796       High

0 Strain