Gene : PGY1 A. thaliana TAIR10
Primary Identifier:  ? AT2G27530 Defline:  (1 of 3) K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)
Genomic Order:  2041 Name:  ? AT2G27530
Secondary Identifier:  ? PAC:19642446
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27530 0.5kb upstream 0.5kb upstream 2129 true Chr2: 11763217-11765345 Arabidopsis thaliana
AT2G27530 0.5kb upstream 0.5kb upstream 500 false Chr2: 11764846-11765345 Arabidopsis thaliana
AT2G27530 0.5kb downstream 0.5kb downstream 2129 true Chr2: 11762717-11764845 Arabidopsis thaliana
AT2G27530 0.5kb downstream 0.5kb downstream 500 false Chr2: 11762717-11763216 Arabidopsis thaliana
AT2G27530 1.0kb upstream 1.0kb upstream 2629 true Chr2: 11763217-11765845 Arabidopsis thaliana
AT2G27530 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11764846-11765845 Arabidopsis thaliana
AT2G27530 1.0kb downstream 1.0kb downstream 2629 true Chr2: 11762217-11764845 Arabidopsis thaliana
AT2G27530 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11762217-11763216 Arabidopsis thaliana
AT2G27530 2.0kb upstream 2.0kb upstream 3629 true Chr2: 11763217-11766845 Arabidopsis thaliana
AT2G27530 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11764846-11766845 Arabidopsis thaliana
AT2G27530 2.0kb downstream 2.0kb downstream 3629 true Chr2: 11761217-11764845 Arabidopsis thaliana
AT2G27530 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11761217-11763216 Arabidopsis thaliana
AT2G27530 5.0kb upstream 5.0kb upstream 6629 true Chr2: 11763217-11769845 Arabidopsis thaliana
AT2G27530 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11764846-11769845 Arabidopsis thaliana
AT2G27530 5.0kb downstream 5.0kb downstream 6629 true Chr2: 11758217-11764845 Arabidopsis thaliana
AT2G27530 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11758217-11763216 Arabidopsis thaliana
AT2G27530 10.0kb upstream 10.0kb upstream 11629 true Chr2: 11763217-11774845 Arabidopsis thaliana
AT2G27530 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11764846-11774845 Arabidopsis thaliana
AT2G27530 10.0kb downstream 10.0kb downstream 11629 true Chr2: 11753217-11764845 Arabidopsis thaliana
AT2G27530 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11753217-11763216 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380124 5261 Brassicaceae View MSA
123837872 5264 Brassicales-Malvales View MSA
124341540 5266 SBM View MSA
124252841 5268 Malvidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 101.932     High  
cufflinks 130.551     High  
cufflinks 90.064     High  
cufflinks 130.776     High  
cufflinks 74.32     High Low
cufflinks 156.107     High High

0 Strain