Gene : AT2G27285 A. thaliana TAIR10
Defline:  (1 of 3) K13206 - coiled-coil domain-containing protein 55 (CCDC55) Genomic Order:  2013
Name:  ? AT2G27285 Secondary Identifier:  ? PAC:19639312
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27285 0.5kb upstream 0.5kb upstream 2659 true Chr2: 11675960-11678618 Arabidopsis thaliana
AT2G27285 0.5kb upstream 0.5kb upstream 500 false Chr2: 11678119-11678618 Arabidopsis thaliana
AT2G27285 0.5kb downstream 0.5kb downstream 2659 true Chr2: 11675460-11678118 Arabidopsis thaliana
AT2G27285 0.5kb downstream 0.5kb downstream 500 false Chr2: 11675460-11675959 Arabidopsis thaliana
AT2G27285 1.0kb upstream 1.0kb upstream 3159 true Chr2: 11675960-11679118 Arabidopsis thaliana
AT2G27285 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11678119-11679118 Arabidopsis thaliana
AT2G27285 1.0kb downstream 1.0kb downstream 3159 true Chr2: 11674960-11678118 Arabidopsis thaliana
AT2G27285 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11674960-11675959 Arabidopsis thaliana
AT2G27285 2.0kb upstream 2.0kb upstream 4159 true Chr2: 11675960-11680118 Arabidopsis thaliana
AT2G27285 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11678119-11680118 Arabidopsis thaliana
AT2G27285 2.0kb downstream 2.0kb downstream 4159 true Chr2: 11673960-11678118 Arabidopsis thaliana
AT2G27285 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11673960-11675959 Arabidopsis thaliana
AT2G27285 5.0kb upstream 5.0kb upstream 7159 true Chr2: 11675960-11683118 Arabidopsis thaliana
AT2G27285 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11678119-11683118 Arabidopsis thaliana
AT2G27285 5.0kb downstream 5.0kb downstream 7159 true Chr2: 11670960-11678118 Arabidopsis thaliana
AT2G27285 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11670960-11675959 Arabidopsis thaliana
AT2G27285 10.0kb upstream 10.0kb upstream 12159 true Chr2: 11675960-11688118 Arabidopsis thaliana
AT2G27285 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11678119-11688118 Arabidopsis thaliana
AT2G27285 10.0kb downstream 10.0kb downstream 12159 true Chr2: 11665960-11678118 Arabidopsis thaliana
AT2G27285 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11665960-11675959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370098 5261 Brassicaceae View MSA
123833460 5264 Brassicales-Malvales View MSA
124340214 5266 SBM View MSA
124243786 5268 Malvidae View MSA
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.362        
cufflinks 13.926        
cufflinks 15.034        
cufflinks 15.236        
cufflinks 15.187        
cufflinks 12.202       Low

0 Strain