Gene : AT2G27140 A. thaliana TAIR10
Defline:  (1 of 17) KOG0710 - Molecular chaperone (small heat-shock protein Hsp26/Hsp42) Genomic Order:  1995
Name:  ? AT2G27140 Secondary Identifier:  ? PAC:19643290
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27140 0.5kb upstream 0.5kb upstream 1444 true Chr2: 11598379-11599822 Arabidopsis thaliana
AT2G27140 0.5kb upstream 0.5kb upstream 500 false Chr2: 11599323-11599822 Arabidopsis thaliana
AT2G27140 0.5kb downstream 0.5kb downstream 1444 true Chr2: 11597879-11599322 Arabidopsis thaliana
AT2G27140 0.5kb downstream 0.5kb downstream 500 false Chr2: 11597879-11598378 Arabidopsis thaliana
AT2G27140 1.0kb upstream 1.0kb upstream 1944 true Chr2: 11598379-11600322 Arabidopsis thaliana
AT2G27140 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11599323-11600322 Arabidopsis thaliana
AT2G27140 1.0kb downstream 1.0kb downstream 1944 true Chr2: 11597379-11599322 Arabidopsis thaliana
AT2G27140 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11597379-11598378 Arabidopsis thaliana
AT2G27140 2.0kb upstream 2.0kb upstream 2944 true Chr2: 11598379-11601322 Arabidopsis thaliana
AT2G27140 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11599323-11601322 Arabidopsis thaliana
AT2G27140 2.0kb downstream 2.0kb downstream 2944 true Chr2: 11596379-11599322 Arabidopsis thaliana
AT2G27140 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11596379-11598378 Arabidopsis thaliana
AT2G27140 5.0kb upstream 5.0kb upstream 5944 true Chr2: 11598379-11604322 Arabidopsis thaliana
AT2G27140 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11599323-11604322 Arabidopsis thaliana
AT2G27140 5.0kb downstream 5.0kb downstream 5944 true Chr2: 11593379-11599322 Arabidopsis thaliana
AT2G27140 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11593379-11598378 Arabidopsis thaliana
AT2G27140 10.0kb upstream 10.0kb upstream 10944 true Chr2: 11598379-11609322 Arabidopsis thaliana
AT2G27140 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11599323-11609322 Arabidopsis thaliana
AT2G27140 10.0kb downstream 10.0kb downstream 10944 true Chr2: 11588379-11599322 Arabidopsis thaliana
AT2G27140 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11588379-11598378 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368812 5261 Brassicaceae View MSA
123835384 5264 Brassicales-Malvales View MSA
124322042 5266 SBM View MSA
124247177 5268 Malvidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.399        
cufflinks 29.158     High  
cufflinks 2.747        
cufflinks 24.379        
cufflinks 1.355       Low
cufflinks 29.793     High  

0 Strain