Gene : CAM5 A. thaliana TAIR10
Primary Identifier:  ? AT2G27030 Defline:  (1 of 8) K02183 - calmodulin (CALM)
Genomic Order:  1983 Name:  ? AT2G27030
Secondary Identifier:  ? PAC:19643482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27030 0.5kb upstream 0.5kb upstream 2830 true Chr2: 11531504-11534333 Arabidopsis thaliana
AT2G27030 0.5kb upstream 0.5kb upstream 500 false Chr2: 11531504-11532003 Arabidopsis thaliana
AT2G27030 0.5kb downstream 0.5kb downstream 2830 true Chr2: 11532004-11534833 Arabidopsis thaliana
AT2G27030 0.5kb downstream 0.5kb downstream 500 false Chr2: 11534334-11534833 Arabidopsis thaliana
AT2G27030 1.0kb upstream 1.0kb upstream 3330 true Chr2: 11531004-11534333 Arabidopsis thaliana
AT2G27030 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11531004-11532003 Arabidopsis thaliana
AT2G27030 1.0kb downstream 1.0kb downstream 3330 true Chr2: 11532004-11535333 Arabidopsis thaliana
AT2G27030 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11534334-11535333 Arabidopsis thaliana
AT2G27030 2.0kb upstream 2.0kb upstream 4330 true Chr2: 11530004-11534333 Arabidopsis thaliana
AT2G27030 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11530004-11532003 Arabidopsis thaliana
AT2G27030 2.0kb downstream 2.0kb downstream 4330 true Chr2: 11532004-11536333 Arabidopsis thaliana
AT2G27030 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11534334-11536333 Arabidopsis thaliana
AT2G27030 5.0kb upstream 5.0kb upstream 7330 true Chr2: 11527004-11534333 Arabidopsis thaliana
AT2G27030 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11527004-11532003 Arabidopsis thaliana
AT2G27030 5.0kb downstream 5.0kb downstream 7330 true Chr2: 11532004-11539333 Arabidopsis thaliana
AT2G27030 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11534334-11539333 Arabidopsis thaliana
AT2G27030 10.0kb upstream 10.0kb upstream 12330 true Chr2: 11522004-11534333 Arabidopsis thaliana
AT2G27030 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11522004-11532003 Arabidopsis thaliana
AT2G27030 10.0kb downstream 10.0kb downstream 12330 true Chr2: 11532004-11544333 Arabidopsis thaliana
AT2G27030 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11534334-11544333 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050545 5273 Angiosperm View MSA
122381738 5261 Brassicaceae View MSA
123841608 5264 Brassicales-Malvales View MSA
124346983 5266 SBM View MSA
124242106 5268 Malvidae View MSA
124069558 5270 Rosid View MSA
123748611 5271 Pentapetalae View MSA
122795237 5272 Eudicot View MSA
121351463 5274 Embryophyte View MSA
123426448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.604        
cufflinks 30.658     High High
cufflinks 17.112        
cufflinks 24.568        
cufflinks 14.555       Low
cufflinks 27.852        

0 Strain