Gene : AT2G15280 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10994:SF77 - RETICULON-LIKE PROTEIN B10-RELATED Genomic Order:  777
Name:  ? AT2G15280 Secondary Identifier:  ? PAC:19638111
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G15280 0.5kb upstream 0.5kb upstream 2697 true Chr2: 6639654-6642350 Arabidopsis thaliana
AT2G15280 0.5kb upstream 0.5kb upstream 500 false Chr2: 6639654-6640153 Arabidopsis thaliana
AT2G15280 0.5kb downstream 0.5kb downstream 2697 true Chr2: 6640154-6642850 Arabidopsis thaliana
AT2G15280 0.5kb downstream 0.5kb downstream 500 false Chr2: 6642351-6642850 Arabidopsis thaliana
AT2G15280 1.0kb upstream 1.0kb upstream 3197 true Chr2: 6639154-6642350 Arabidopsis thaliana
AT2G15280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6639154-6640153 Arabidopsis thaliana
AT2G15280 1.0kb downstream 1.0kb downstream 3197 true Chr2: 6640154-6643350 Arabidopsis thaliana
AT2G15280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6642351-6643350 Arabidopsis thaliana
AT2G15280 2.0kb upstream 2.0kb upstream 4197 true Chr2: 6638154-6642350 Arabidopsis thaliana
AT2G15280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6638154-6640153 Arabidopsis thaliana
AT2G15280 2.0kb downstream 2.0kb downstream 4197 true Chr2: 6640154-6644350 Arabidopsis thaliana
AT2G15280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6642351-6644350 Arabidopsis thaliana
AT2G15280 5.0kb upstream 5.0kb upstream 7197 true Chr2: 6635154-6642350 Arabidopsis thaliana
AT2G15280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6635154-6640153 Arabidopsis thaliana
AT2G15280 5.0kb downstream 5.0kb downstream 7197 true Chr2: 6640154-6647350 Arabidopsis thaliana
AT2G15280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6642351-6647350 Arabidopsis thaliana
AT2G15280 10.0kb upstream 10.0kb upstream 12197 true Chr2: 6630154-6642350 Arabidopsis thaliana
AT2G15280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6630154-6640153 Arabidopsis thaliana
AT2G15280 10.0kb downstream 10.0kb downstream 12197 true Chr2: 6640154-6652350 Arabidopsis thaliana
AT2G15280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6642351-6652350 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361586 5261 Brassicaceae View MSA
123839223 5264 Brassicales-Malvales View MSA
124343736 5266 SBM View MSA
124253907 5268 Malvidae View MSA
124060883 5270 Rosid View MSA
123752394 5271 Pentapetalae View MSA
122786590 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.537        
cufflinks 4.189        
cufflinks 3.164        
cufflinks 4.027        
cufflinks 2.699       Low
cufflinks 3.898        

0 Strain