Gene : VSR3 A. thaliana TAIR10
Primary Identifier:  ? AT2G14740 Defline:  (1 of 2) PTHR22765//PTHR22765:SF54 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 3-RELATED
Genomic Order:  739 Name:  ? AT2G14740
Secondary Identifier:  ? PAC:19642537
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G14740 0.5kb upstream 0.5kb upstream 4195 true Chr2: 6308395-6312589 Arabidopsis thaliana
AT2G14740 0.5kb upstream 0.5kb upstream 500 false Chr2: 6308395-6308894 Arabidopsis thaliana
AT2G14740 0.5kb downstream 0.5kb downstream 4195 true Chr2: 6308895-6313089 Arabidopsis thaliana
AT2G14740 0.5kb downstream 0.5kb downstream 500 false Chr2: 6312590-6313089 Arabidopsis thaliana
AT2G14740 1.0kb upstream 1.0kb upstream 4695 true Chr2: 6307895-6312589 Arabidopsis thaliana
AT2G14740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6307895-6308894 Arabidopsis thaliana
AT2G14740 1.0kb downstream 1.0kb downstream 4695 true Chr2: 6308895-6313589 Arabidopsis thaliana
AT2G14740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6312590-6313589 Arabidopsis thaliana
AT2G14740 2.0kb upstream 2.0kb upstream 5695 true Chr2: 6306895-6312589 Arabidopsis thaliana
AT2G14740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6306895-6308894 Arabidopsis thaliana
AT2G14740 2.0kb downstream 2.0kb downstream 5695 true Chr2: 6308895-6314589 Arabidopsis thaliana
AT2G14740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6312590-6314589 Arabidopsis thaliana
AT2G14740 5.0kb upstream 5.0kb upstream 8695 true Chr2: 6303895-6312589 Arabidopsis thaliana
AT2G14740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6303895-6308894 Arabidopsis thaliana
AT2G14740 5.0kb downstream 5.0kb downstream 8695 true Chr2: 6308895-6317589 Arabidopsis thaliana
AT2G14740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6312590-6317589 Arabidopsis thaliana
AT2G14740 10.0kb upstream 10.0kb upstream 13695 true Chr2: 6298895-6312589 Arabidopsis thaliana
AT2G14740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6298895-6308894 Arabidopsis thaliana
AT2G14740 10.0kb downstream 10.0kb downstream 13695 true Chr2: 6308895-6322589 Arabidopsis thaliana
AT2G14740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6312590-6322589 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364317 5261 Brassicaceae View MSA
123840796 5264 Brassicales-Malvales View MSA
124350729 5266 SBM View MSA
124251078 5268 Malvidae View MSA
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.407        
cufflinks 9.718        
cufflinks 5.411       Low
cufflinks 10.158        
cufflinks 6.008        
cufflinks 10.13        

0 Strain