Gene : CHX15 A. thaliana TAIR10
Primary Identifier:  ? AT2G13620 Defline:  (1 of 41) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger)
Genomic Order:  672 Name:  ? AT2G13620
Secondary Identifier:  ? PAC:19642269
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G13620 0.5kb upstream 0.5kb upstream 3116 true Chr2: 5677506-5680621 Arabidopsis thaliana
AT2G13620 0.5kb upstream 0.5kb upstream 500 false Chr2: 5677506-5678005 Arabidopsis thaliana
AT2G13620 0.5kb downstream 0.5kb downstream 3116 true Chr2: 5678006-5681121 Arabidopsis thaliana
AT2G13620 0.5kb downstream 0.5kb downstream 500 false Chr2: 5680622-5681121 Arabidopsis thaliana
AT2G13620 1.0kb upstream 1.0kb upstream 3616 true Chr2: 5677006-5680621 Arabidopsis thaliana
AT2G13620 1.0kb upstream 1.0kb upstream 1000 false Chr2: 5677006-5678005 Arabidopsis thaliana
AT2G13620 1.0kb downstream 1.0kb downstream 3616 true Chr2: 5678006-5681621 Arabidopsis thaliana
AT2G13620 1.0kb downstream 1.0kb downstream 1000 false Chr2: 5680622-5681621 Arabidopsis thaliana
AT2G13620 2.0kb upstream 2.0kb upstream 4616 true Chr2: 5676006-5680621 Arabidopsis thaliana
AT2G13620 2.0kb upstream 2.0kb upstream 2000 false Chr2: 5676006-5678005 Arabidopsis thaliana
AT2G13620 2.0kb downstream 2.0kb downstream 4616 true Chr2: 5678006-5682621 Arabidopsis thaliana
AT2G13620 2.0kb downstream 2.0kb downstream 2000 false Chr2: 5680622-5682621 Arabidopsis thaliana
AT2G13620 5.0kb upstream 5.0kb upstream 7616 true Chr2: 5673006-5680621 Arabidopsis thaliana
AT2G13620 5.0kb upstream 5.0kb upstream 5000 false Chr2: 5673006-5678005 Arabidopsis thaliana
AT2G13620 5.0kb downstream 5.0kb downstream 7616 true Chr2: 5678006-5685621 Arabidopsis thaliana
AT2G13620 5.0kb downstream 5.0kb downstream 5000 false Chr2: 5680622-5685621 Arabidopsis thaliana
AT2G13620 10.0kb upstream 10.0kb upstream 12616 true Chr2: 5668006-5680621 Arabidopsis thaliana
AT2G13620 10.0kb upstream 10.0kb upstream 10000 false Chr2: 5668006-5678005 Arabidopsis thaliana
AT2G13620 10.0kb downstream 10.0kb downstream 12616 true Chr2: 5678006-5690621 Arabidopsis thaliana
AT2G13620 10.0kb downstream 10.0kb downstream 10000 false Chr2: 5680622-5690621 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370280 5261 Brassicaceae View MSA
123839841 5264 Brassicales-Malvales View MSA
124337893 5266 SBM View MSA
124243043 5268 Malvidae View MSA
124060534 5270 Rosid View MSA
123747006 5271 Pentapetalae View MSA
122791635 5272 Eudicot View MSA
122049738 5273 Angiosperm View MSA
121311566 5274 Embryophyte View MSA
123428827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain