Gene : AT2G12550 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12948//PTHR12948:SF3 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN // NEDD8 ULTIMATE BUSTER 1 Genomic Order:  634
Name:  ? AT2G12550 Secondary Identifier:  ? PAC:19638941
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G12550 0.5kb upstream 0.5kb upstream 4380 true Chr2: 5114368-5118747 Arabidopsis thaliana
AT2G12550 0.5kb upstream 0.5kb upstream 500 false Chr2: 5114368-5114867 Arabidopsis thaliana
AT2G12550 0.5kb downstream 0.5kb downstream 4380 true Chr2: 5114868-5119247 Arabidopsis thaliana
AT2G12550 0.5kb downstream 0.5kb downstream 500 false Chr2: 5118748-5119247 Arabidopsis thaliana
AT2G12550 1.0kb upstream 1.0kb upstream 4880 true Chr2: 5113868-5118747 Arabidopsis thaliana
AT2G12550 1.0kb upstream 1.0kb upstream 1000 false Chr2: 5113868-5114867 Arabidopsis thaliana
AT2G12550 1.0kb downstream 1.0kb downstream 4880 true Chr2: 5114868-5119747 Arabidopsis thaliana
AT2G12550 1.0kb downstream 1.0kb downstream 1000 false Chr2: 5118748-5119747 Arabidopsis thaliana
AT2G12550 2.0kb upstream 2.0kb upstream 5880 true Chr2: 5112868-5118747 Arabidopsis thaliana
AT2G12550 2.0kb upstream 2.0kb upstream 2000 false Chr2: 5112868-5114867 Arabidopsis thaliana
AT2G12550 2.0kb downstream 2.0kb downstream 5880 true Chr2: 5114868-5120747 Arabidopsis thaliana
AT2G12550 2.0kb downstream 2.0kb downstream 2000 false Chr2: 5118748-5120747 Arabidopsis thaliana
AT2G12550 5.0kb upstream 5.0kb upstream 8880 true Chr2: 5109868-5118747 Arabidopsis thaliana
AT2G12550 5.0kb upstream 5.0kb upstream 5000 false Chr2: 5109868-5114867 Arabidopsis thaliana
AT2G12550 5.0kb downstream 5.0kb downstream 8880 true Chr2: 5114868-5123747 Arabidopsis thaliana
AT2G12550 5.0kb downstream 5.0kb downstream 5000 false Chr2: 5118748-5123747 Arabidopsis thaliana
AT2G12550 10.0kb upstream 10.0kb upstream 13880 true Chr2: 5104868-5118747 Arabidopsis thaliana
AT2G12550 10.0kb upstream 10.0kb upstream 10000 false Chr2: 5104868-5114867 Arabidopsis thaliana
AT2G12550 10.0kb downstream 10.0kb downstream 13880 true Chr2: 5114868-5128747 Arabidopsis thaliana
AT2G12550 10.0kb downstream 10.0kb downstream 10000 false Chr2: 5118748-5128747 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373314 5261 Brassicaceae View MSA
123832175 5264 Brassicales-Malvales View MSA
124343244 5266 SBM View MSA
124240616 5268 Malvidae View MSA
124064504 5270 Rosid View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.012        
cufflinks 5.276       High
cufflinks 2.348       Low
cufflinks 5.393       High
cufflinks 2.77        
cufflinks 4.478        

0 Strain