Gene : AT2G10940 A. thaliana TAIR10
Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  594
Name:  ? AT2G10940 Secondary Identifier:  ? PAC:19640903
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G10940 0.5kb upstream 0.5kb upstream 2192 true Chr2: 4310412-4312603 Arabidopsis thaliana
AT2G10940 0.5kb upstream 0.5kb upstream 500 false Chr2: 4312104-4312603 Arabidopsis thaliana
AT2G10940 0.5kb downstream 0.5kb downstream 2192 true Chr2: 4309912-4312103 Arabidopsis thaliana
AT2G10940 0.5kb downstream 0.5kb downstream 500 false Chr2: 4309912-4310411 Arabidopsis thaliana
AT2G10940 1.0kb upstream 1.0kb upstream 2692 true Chr2: 4310412-4313103 Arabidopsis thaliana
AT2G10940 1.0kb upstream 1.0kb upstream 1000 false Chr2: 4312104-4313103 Arabidopsis thaliana
AT2G10940 1.0kb downstream 1.0kb downstream 2692 true Chr2: 4309412-4312103 Arabidopsis thaliana
AT2G10940 1.0kb downstream 1.0kb downstream 1000 false Chr2: 4309412-4310411 Arabidopsis thaliana
AT2G10940 2.0kb upstream 2.0kb upstream 3692 true Chr2: 4310412-4314103 Arabidopsis thaliana
AT2G10940 2.0kb upstream 2.0kb upstream 2000 false Chr2: 4312104-4314103 Arabidopsis thaliana
AT2G10940 2.0kb downstream 2.0kb downstream 3692 true Chr2: 4308412-4312103 Arabidopsis thaliana
AT2G10940 2.0kb downstream 2.0kb downstream 2000 false Chr2: 4308412-4310411 Arabidopsis thaliana
AT2G10940 5.0kb upstream 5.0kb upstream 6692 true Chr2: 4310412-4317103 Arabidopsis thaliana
AT2G10940 5.0kb upstream 5.0kb upstream 5000 false Chr2: 4312104-4317103 Arabidopsis thaliana
AT2G10940 5.0kb downstream 5.0kb downstream 6692 true Chr2: 4305412-4312103 Arabidopsis thaliana
AT2G10940 5.0kb downstream 5.0kb downstream 5000 false Chr2: 4305412-4310411 Arabidopsis thaliana
AT2G10940 10.0kb upstream 10.0kb upstream 11692 true Chr2: 4310412-4322103 Arabidopsis thaliana
AT2G10940 10.0kb upstream 10.0kb upstream 10000 false Chr2: 4312104-4322103 Arabidopsis thaliana
AT2G10940 10.0kb downstream 10.0kb downstream 11692 true Chr2: 4300412-4312103 Arabidopsis thaliana
AT2G10940 10.0kb downstream 10.0kb downstream 10000 false Chr2: 4300412-4310411 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364173 5261 Brassicaceae View MSA
123839524 5264 Brassicales-Malvales View MSA
124350591 5266 SBM View MSA
124253998 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 224.024     High  
cufflinks 0.018     Low Low
cufflinks 206.165     High  
cufflinks 0.081     Low  
cufflinks 95.36     High  
cufflinks 0.063     Low  

0 Strain