Sequence Feature Displayer
Ontology Annotation Displayer
3 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana CALVIN-PWY | Arabidopsis thaliana | pathologic | |
Athaliana PHOTOALL-PWY | Arabidopsis thaliana | pathologic | |
Athaliana PWY-5723 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT2G07732 0.5kb upstream | 0.5kb | upstream | 1107 | true | Chr2: 3468168-3469274 | Arabidopsis thaliana |
AT2G07732 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr2: 3468775-3469274 | Arabidopsis thaliana |
AT2G07732 0.5kb downstream | 0.5kb | downstream | 1107 | true | Chr2: 3467668-3468774 | Arabidopsis thaliana |
AT2G07732 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr2: 3467668-3468167 | Arabidopsis thaliana |
AT2G07732 1.0kb upstream | 1.0kb | upstream | 1607 | true | Chr2: 3468168-3469774 | Arabidopsis thaliana |
AT2G07732 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr2: 3468775-3469774 | Arabidopsis thaliana |
AT2G07732 1.0kb downstream | 1.0kb | downstream | 1607 | true | Chr2: 3467168-3468774 | Arabidopsis thaliana |
AT2G07732 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr2: 3467168-3468167 | Arabidopsis thaliana |
AT2G07732 2.0kb upstream | 2.0kb | upstream | 2607 | true | Chr2: 3468168-3470774 | Arabidopsis thaliana |
AT2G07732 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr2: 3468775-3470774 | Arabidopsis thaliana |
AT2G07732 2.0kb downstream | 2.0kb | downstream | 2607 | true | Chr2: 3466168-3468774 | Arabidopsis thaliana |
AT2G07732 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr2: 3466168-3468167 | Arabidopsis thaliana |
AT2G07732 5.0kb upstream | 5.0kb | upstream | 5607 | true | Chr2: 3468168-3473774 | Arabidopsis thaliana |
AT2G07732 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr2: 3468775-3473774 | Arabidopsis thaliana |
AT2G07732 5.0kb downstream | 5.0kb | downstream | 5607 | true | Chr2: 3463168-3468774 | Arabidopsis thaliana |
AT2G07732 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr2: 3463168-3468167 | Arabidopsis thaliana |
AT2G07732 10.0kb upstream | 10.0kb | upstream | 10607 | true | Chr2: 3468168-3478774 | Arabidopsis thaliana |
AT2G07732 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr2: 3468775-3478774 | Arabidopsis thaliana |
AT2G07732 10.0kb downstream | 10.0kb | downstream | 10607 | true | Chr2: 3458168-3468774 | Arabidopsis thaliana |
AT2G07732 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr2: 3458168-3468167 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121780125 | 5273 | Angiosperm | View MSA |
122331657 | 5261 | Brassicaceae | View MSA |
123772813 | 5264 | Brassicales-Malvales | View MSA |
124271320 | 5266 | SBM | View MSA |
124127317 | 5268 | Malvidae | View MSA |
123856175 | 5270 | Rosid | View MSA |
123745193 | 5271 | Pentapetalae | View MSA |
122771401 | 5272 | Eudicot | View MSA |
121051752 | 5274 | Embryophyte | View MSA |
123091827 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.024 | Low | Low | ||
cufflinks | 0.049 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.078 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.332 | Low | High |