Gene : CAS1 A. thaliana TAIR10
Primary Identifier:  ? AT2G07050 Defline:  (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase
Genomic Order:  483 Name:  ? AT2G07050
Secondary Identifier:  ? PAC:19639110
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2541 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G07050 0.5kb upstream 0.5kb upstream 6726 true Chr2: 2923947-2930672 Arabidopsis thaliana
AT2G07050 0.5kb upstream 0.5kb upstream 500 false Chr2: 2923947-2924446 Arabidopsis thaliana
AT2G07050 0.5kb downstream 0.5kb downstream 6726 true Chr2: 2924447-2931172 Arabidopsis thaliana
AT2G07050 0.5kb downstream 0.5kb downstream 500 false Chr2: 2930673-2931172 Arabidopsis thaliana
AT2G07050 1.0kb upstream 1.0kb upstream 7226 true Chr2: 2923447-2930672 Arabidopsis thaliana
AT2G07050 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2923447-2924446 Arabidopsis thaliana
AT2G07050 1.0kb downstream 1.0kb downstream 7226 true Chr2: 2924447-2931672 Arabidopsis thaliana
AT2G07050 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2930673-2931672 Arabidopsis thaliana
AT2G07050 2.0kb upstream 2.0kb upstream 8226 true Chr2: 2922447-2930672 Arabidopsis thaliana
AT2G07050 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2922447-2924446 Arabidopsis thaliana
AT2G07050 2.0kb downstream 2.0kb downstream 8226 true Chr2: 2924447-2932672 Arabidopsis thaliana
AT2G07050 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2930673-2932672 Arabidopsis thaliana
AT2G07050 5.0kb upstream 5.0kb upstream 11226 true Chr2: 2919447-2930672 Arabidopsis thaliana
AT2G07050 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2919447-2924446 Arabidopsis thaliana
AT2G07050 5.0kb downstream 5.0kb downstream 11226 true Chr2: 2924447-2935672 Arabidopsis thaliana
AT2G07050 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2930673-2935672 Arabidopsis thaliana
AT2G07050 10.0kb upstream 10.0kb upstream 16226 true Chr2: 2914447-2930672 Arabidopsis thaliana
AT2G07050 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2914447-2924446 Arabidopsis thaliana
AT2G07050 10.0kb downstream 10.0kb downstream 16226 true Chr2: 2924447-2940672 Arabidopsis thaliana
AT2G07050 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2930673-2940672 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362995 5261 Brassicaceae View MSA
123832061 5264 Brassicales-Malvales View MSA
124341862 5266 SBM View MSA
124253779 5268 Malvidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.625        
cufflinks 16.738        
cufflinks 12.197       Low
cufflinks 19.239        
cufflinks 13.334        
cufflinks 22.111       High

0 Strain