Gene : AT2G05910 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31087//PTHR31087:SF3 - FAMILY NOT NAMED // PROTEIN LURP-ONE-RELATED 16-RELATED Genomic Order:  442
Name:  ? AT2G05910 Secondary Identifier:  ? PAC:19640941
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05910 0.5kb upstream 0.5kb upstream 1599 true Chr2: 2258293-2259891 Arabidopsis thaliana
AT2G05910 0.5kb upstream 0.5kb upstream 500 false Chr2: 2259392-2259891 Arabidopsis thaliana
AT2G05910 0.5kb downstream 0.5kb downstream 1599 true Chr2: 2257793-2259391 Arabidopsis thaliana
AT2G05910 0.5kb downstream 0.5kb downstream 500 false Chr2: 2257793-2258292 Arabidopsis thaliana
AT2G05910 1.0kb upstream 1.0kb upstream 2099 true Chr2: 2258293-2260391 Arabidopsis thaliana
AT2G05910 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2259392-2260391 Arabidopsis thaliana
AT2G05910 1.0kb downstream 1.0kb downstream 2099 true Chr2: 2257293-2259391 Arabidopsis thaliana
AT2G05910 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2257293-2258292 Arabidopsis thaliana
AT2G05910 2.0kb upstream 2.0kb upstream 3099 true Chr2: 2258293-2261391 Arabidopsis thaliana
AT2G05910 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2259392-2261391 Arabidopsis thaliana
AT2G05910 2.0kb downstream 2.0kb downstream 3099 true Chr2: 2256293-2259391 Arabidopsis thaliana
AT2G05910 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2256293-2258292 Arabidopsis thaliana
AT2G05910 5.0kb upstream 5.0kb upstream 6099 true Chr2: 2258293-2264391 Arabidopsis thaliana
AT2G05910 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2259392-2264391 Arabidopsis thaliana
AT2G05910 5.0kb downstream 5.0kb downstream 6099 true Chr2: 2253293-2259391 Arabidopsis thaliana
AT2G05910 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2253293-2258292 Arabidopsis thaliana
AT2G05910 10.0kb upstream 10.0kb upstream 11099 true Chr2: 2258293-2269391 Arabidopsis thaliana
AT2G05910 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2259392-2269391 Arabidopsis thaliana
AT2G05910 10.0kb downstream 10.0kb downstream 11099 true Chr2: 2248293-2259391 Arabidopsis thaliana
AT2G05910 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2248293-2258292 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380336 5261 Brassicaceae View MSA
123829018 5264 Brassicales-Malvales View MSA
124337783 5266 SBM View MSA
124243247 5268 Malvidae View MSA
124061056 5270 Rosid View MSA
123740400 5271 Pentapetalae View MSA
122786459 5272 Eudicot View MSA
122042677 5273 Angiosperm View MSA
121309998 5274 Embryophyte View MSA
123347607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.409       Low
cufflinks 4.017        
cufflinks 0.722        
cufflinks 5.814       High
cufflinks 0.972        
cufflinks 4.742        

0 Strain