Gene : SDG11 A. thaliana TAIR10
Primary Identifier:  ? AT2G05900 Defline:  (1 of 1) PTHR22884:SF300 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH10-RELATED
Genomic Order:  441 Name:  ? AT2G05900
Secondary Identifier:  ? PAC:19640224
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05900 0.5kb upstream 0.5kb upstream 1439 true Chr2: 2256470-2257908 Arabidopsis thaliana
AT2G05900 0.5kb upstream 0.5kb upstream 500 false Chr2: 2256470-2256969 Arabidopsis thaliana
AT2G05900 0.5kb downstream 0.5kb downstream 1439 true Chr2: 2256970-2258408 Arabidopsis thaliana
AT2G05900 0.5kb downstream 0.5kb downstream 500 false Chr2: 2257909-2258408 Arabidopsis thaliana
AT2G05900 1.0kb upstream 1.0kb upstream 1939 true Chr2: 2255970-2257908 Arabidopsis thaliana
AT2G05900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2255970-2256969 Arabidopsis thaliana
AT2G05900 1.0kb downstream 1.0kb downstream 1939 true Chr2: 2256970-2258908 Arabidopsis thaliana
AT2G05900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2257909-2258908 Arabidopsis thaliana
AT2G05900 2.0kb upstream 2.0kb upstream 2939 true Chr2: 2254970-2257908 Arabidopsis thaliana
AT2G05900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2254970-2256969 Arabidopsis thaliana
AT2G05900 2.0kb downstream 2.0kb downstream 2939 true Chr2: 2256970-2259908 Arabidopsis thaliana
AT2G05900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2257909-2259908 Arabidopsis thaliana
AT2G05900 5.0kb upstream 5.0kb upstream 5939 true Chr2: 2251970-2257908 Arabidopsis thaliana
AT2G05900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2251970-2256969 Arabidopsis thaliana
AT2G05900 5.0kb downstream 5.0kb downstream 5939 true Chr2: 2256970-2262908 Arabidopsis thaliana
AT2G05900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2257909-2262908 Arabidopsis thaliana
AT2G05900 10.0kb upstream 10.0kb upstream 10939 true Chr2: 2246970-2257908 Arabidopsis thaliana
AT2G05900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2246970-2256969 Arabidopsis thaliana
AT2G05900 10.0kb downstream 10.0kb downstream 10939 true Chr2: 2256970-2267908 Arabidopsis thaliana
AT2G05900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2257909-2267908 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329314 5261 Brassicaceae Singleton cluster - no MSA
123770624 5264 Brassicales-Malvales Singleton cluster - no MSA
124269162 5266 SBM Singleton cluster - no MSA
124125318 5268 Malvidae Singleton cluster - no MSA
123854297 5270 Rosid Singleton cluster - no MSA
123440323 5271 Pentapetalae Singleton cluster - no MSA
122475912 5272 Eudicot Singleton cluster - no MSA
122050762 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain