Gene : AT2G06500 A. thaliana TAIR10
Defline:  (1 of 5) PTHR11697:SF116 - AC-LIKE TRANSPOSASE-RELATED Genomic Order:  462
Name:  ? AT2G06500 Secondary Identifier:  ? PAC:19643551
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G06500 0.5kb upstream 0.5kb upstream 3006 true Chr2: 2580718-2583723 Arabidopsis thaliana
AT2G06500 0.5kb upstream 0.5kb upstream 500 false Chr2: 2583224-2583723 Arabidopsis thaliana
AT2G06500 0.5kb downstream 0.5kb downstream 3006 true Chr2: 2580218-2583223 Arabidopsis thaliana
AT2G06500 0.5kb downstream 0.5kb downstream 500 false Chr2: 2580218-2580717 Arabidopsis thaliana
AT2G06500 1.0kb upstream 1.0kb upstream 3506 true Chr2: 2580718-2584223 Arabidopsis thaliana
AT2G06500 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2583224-2584223 Arabidopsis thaliana
AT2G06500 1.0kb downstream 1.0kb downstream 3506 true Chr2: 2579718-2583223 Arabidopsis thaliana
AT2G06500 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2579718-2580717 Arabidopsis thaliana
AT2G06500 2.0kb upstream 2.0kb upstream 4506 true Chr2: 2580718-2585223 Arabidopsis thaliana
AT2G06500 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2583224-2585223 Arabidopsis thaliana
AT2G06500 2.0kb downstream 2.0kb downstream 4506 true Chr2: 2578718-2583223 Arabidopsis thaliana
AT2G06500 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2578718-2580717 Arabidopsis thaliana
AT2G06500 5.0kb upstream 5.0kb upstream 7506 true Chr2: 2580718-2588223 Arabidopsis thaliana
AT2G06500 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2583224-2588223 Arabidopsis thaliana
AT2G06500 5.0kb downstream 5.0kb downstream 7506 true Chr2: 2575718-2583223 Arabidopsis thaliana
AT2G06500 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2575718-2580717 Arabidopsis thaliana
AT2G06500 10.0kb upstream 10.0kb upstream 12506 true Chr2: 2580718-2593223 Arabidopsis thaliana
AT2G06500 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2583224-2593223 Arabidopsis thaliana
AT2G06500 10.0kb downstream 10.0kb downstream 12506 true Chr2: 2570718-2583223 Arabidopsis thaliana
AT2G06500 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2570718-2580717 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029782 5273 Angiosperm View MSA
122329648 5261 Brassicaceae Singleton cluster - no MSA
123770942 5264 Brassicales-Malvales Singleton cluster - no MSA
124269476 5266 SBM Singleton cluster - no MSA
124125614 5268 Malvidae Singleton cluster - no MSA
123854576 5270 Rosid Singleton cluster - no MSA
123440591 5271 Pentapetalae Singleton cluster - no MSA
122476176 5272 Eudicot Singleton cluster - no MSA
121351340 5274 Embryophyte View MSA
123426120 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain