Gene : GRP9 A. thaliana TAIR10
Primary Identifier:  ? AT2G05440 Defline:  (1 of 6) PF07172 - Glycine rich protein family (GRP)
Genomic Order:  413 Name:  ? AT2G05440
Secondary Identifier:  ? PAC:19641594
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05440 0.5kb upstream 0.5kb upstream 1585 true Chr2: 1992582-1994166 Arabidopsis thaliana
AT2G05440 0.5kb upstream 0.5kb upstream 500 false Chr2: 1992582-1993081 Arabidopsis thaliana
AT2G05440 0.5kb downstream 0.5kb downstream 1585 true Chr2: 1993082-1994666 Arabidopsis thaliana
AT2G05440 0.5kb downstream 0.5kb downstream 500 false Chr2: 1994167-1994666 Arabidopsis thaliana
AT2G05440 1.0kb upstream 1.0kb upstream 2085 true Chr2: 1992082-1994166 Arabidopsis thaliana
AT2G05440 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1992082-1993081 Arabidopsis thaliana
AT2G05440 1.0kb downstream 1.0kb downstream 2085 true Chr2: 1993082-1995166 Arabidopsis thaliana
AT2G05440 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1994167-1995166 Arabidopsis thaliana
AT2G05440 2.0kb upstream 2.0kb upstream 3085 true Chr2: 1991082-1994166 Arabidopsis thaliana
AT2G05440 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1991082-1993081 Arabidopsis thaliana
AT2G05440 2.0kb downstream 2.0kb downstream 3085 true Chr2: 1993082-1996166 Arabidopsis thaliana
AT2G05440 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1994167-1996166 Arabidopsis thaliana
AT2G05440 5.0kb upstream 5.0kb upstream 6085 true Chr2: 1988082-1994166 Arabidopsis thaliana
AT2G05440 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1988082-1993081 Arabidopsis thaliana
AT2G05440 5.0kb downstream 5.0kb downstream 6085 true Chr2: 1993082-1999166 Arabidopsis thaliana
AT2G05440 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1994167-1999166 Arabidopsis thaliana
AT2G05440 10.0kb upstream 10.0kb upstream 11085 true Chr2: 1983082-1994166 Arabidopsis thaliana
AT2G05440 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1983082-1993081 Arabidopsis thaliana
AT2G05440 10.0kb downstream 10.0kb downstream 11085 true Chr2: 1993082-2004166 Arabidopsis thaliana
AT2G05440 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1994167-2004166 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381030 5261 Brassicaceae View MSA
123803024 5264 Brassicales-Malvales View MSA
124300166 5266 SBM View MSA
124151417 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.147       Low
cufflinks 466.135     High High
cufflinks 1.66        
cufflinks 316.66     High  
cufflinks 2.024        
cufflinks 178.762     High  

0 Strain