Gene : AT2G05230 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24078//PTHR24078:SF277 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  396
Name:  ? AT2G05230 Secondary Identifier:  ? PAC:19641209
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05230 0.5kb upstream 0.5kb upstream 3796 true Chr2: 1899507-1903302 Arabidopsis thaliana
AT2G05230 0.5kb upstream 0.5kb upstream 500 false Chr2: 1902803-1903302 Arabidopsis thaliana
AT2G05230 0.5kb downstream 0.5kb downstream 3796 true Chr2: 1899007-1902802 Arabidopsis thaliana
AT2G05230 0.5kb downstream 0.5kb downstream 500 false Chr2: 1899007-1899506 Arabidopsis thaliana
AT2G05230 1.0kb upstream 1.0kb upstream 4296 true Chr2: 1899507-1903802 Arabidopsis thaliana
AT2G05230 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1902803-1903802 Arabidopsis thaliana
AT2G05230 1.0kb downstream 1.0kb downstream 4296 true Chr2: 1898507-1902802 Arabidopsis thaliana
AT2G05230 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1898507-1899506 Arabidopsis thaliana
AT2G05230 2.0kb upstream 2.0kb upstream 5296 true Chr2: 1899507-1904802 Arabidopsis thaliana
AT2G05230 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1902803-1904802 Arabidopsis thaliana
AT2G05230 2.0kb downstream 2.0kb downstream 5296 true Chr2: 1897507-1902802 Arabidopsis thaliana
AT2G05230 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1897507-1899506 Arabidopsis thaliana
AT2G05230 5.0kb upstream 5.0kb upstream 8296 true Chr2: 1899507-1907802 Arabidopsis thaliana
AT2G05230 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1902803-1907802 Arabidopsis thaliana
AT2G05230 5.0kb downstream 5.0kb downstream 8296 true Chr2: 1894507-1902802 Arabidopsis thaliana
AT2G05230 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1894507-1899506 Arabidopsis thaliana
AT2G05230 10.0kb upstream 10.0kb upstream 13296 true Chr2: 1899507-1912802 Arabidopsis thaliana
AT2G05230 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1902803-1912802 Arabidopsis thaliana
AT2G05230 10.0kb downstream 10.0kb downstream 13296 true Chr2: 1889507-1902802 Arabidopsis thaliana
AT2G05230 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1889507-1899506 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366743 5261 Brassicaceae View MSA
123837988 5264 Brassicales-Malvales View MSA
124336400 5266 SBM View MSA
124242270 5268 Malvidae View MSA
124063171 5270 Rosid View MSA
123750795 5271 Pentapetalae View MSA
122796455 5272 Eudicot View MSA
122048090 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.421        
cufflinks 0.411        
cufflinks 0.278       Low
cufflinks 0.418        
cufflinks 0.307       Low
cufflinks 0.445        

0 Strain