Gene : AT2G04480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR35708:SF1 - GB Genomic Order:  341
Name:  ? AT2G04480 Secondary Identifier:  ? PAC:19639479
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G04480 0.5kb upstream 0.5kb upstream 1733 true Chr2: 1554282-1556014 Arabidopsis thaliana
AT2G04480 0.5kb upstream 0.5kb upstream 500 false Chr2: 1555515-1556014 Arabidopsis thaliana
AT2G04480 0.5kb downstream 0.5kb downstream 1733 true Chr2: 1553782-1555514 Arabidopsis thaliana
AT2G04480 0.5kb downstream 0.5kb downstream 500 false Chr2: 1553782-1554281 Arabidopsis thaliana
AT2G04480 1.0kb upstream 1.0kb upstream 2233 true Chr2: 1554282-1556514 Arabidopsis thaliana
AT2G04480 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1555515-1556514 Arabidopsis thaliana
AT2G04480 1.0kb downstream 1.0kb downstream 2233 true Chr2: 1553282-1555514 Arabidopsis thaliana
AT2G04480 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1553282-1554281 Arabidopsis thaliana
AT2G04480 2.0kb upstream 2.0kb upstream 3233 true Chr2: 1554282-1557514 Arabidopsis thaliana
AT2G04480 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1555515-1557514 Arabidopsis thaliana
AT2G04480 2.0kb downstream 2.0kb downstream 3233 true Chr2: 1552282-1555514 Arabidopsis thaliana
AT2G04480 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1552282-1554281 Arabidopsis thaliana
AT2G04480 5.0kb upstream 5.0kb upstream 6233 true Chr2: 1554282-1560514 Arabidopsis thaliana
AT2G04480 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1555515-1560514 Arabidopsis thaliana
AT2G04480 5.0kb downstream 5.0kb downstream 6233 true Chr2: 1549282-1555514 Arabidopsis thaliana
AT2G04480 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1549282-1554281 Arabidopsis thaliana
AT2G04480 10.0kb upstream 10.0kb upstream 11233 true Chr2: 1554282-1565514 Arabidopsis thaliana
AT2G04480 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1555515-1565514 Arabidopsis thaliana
AT2G04480 10.0kb downstream 10.0kb downstream 11233 true Chr2: 1544282-1555514 Arabidopsis thaliana
AT2G04480 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1544282-1554281 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367019 5261 Brassicaceae View MSA
123838450 5264 Brassicales-Malvales View MSA
124351090 5266 SBM View MSA
124252320 5268 Malvidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.221     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.357     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low Low

0 Strain