Gene : bZIP48 A. thaliana TAIR10
Primary Identifier:  ? AT2G04038 Defline:  (1 of 2) PTHR22952:SF110 - BZIP PROTEIN (ATBZIP48)-RELATED
Genomic Order:  303 Name:  ? AT2G04038
Secondary Identifier:  ? PAC:19639532
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G04038 0.5kb upstream 0.5kb upstream 1001 true Chr2: 1331419-1332419 Arabidopsis thaliana
AT2G04038 0.5kb upstream 0.5kb upstream 500 false Chr2: 1331419-1331918 Arabidopsis thaliana
AT2G04038 0.5kb downstream 0.5kb downstream 1001 true Chr2: 1331919-1332919 Arabidopsis thaliana
AT2G04038 0.5kb downstream 0.5kb downstream 500 false Chr2: 1332420-1332919 Arabidopsis thaliana
AT2G04038 1.0kb upstream 1.0kb upstream 1501 true Chr2: 1330919-1332419 Arabidopsis thaliana
AT2G04038 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1330919-1331918 Arabidopsis thaliana
AT2G04038 1.0kb downstream 1.0kb downstream 1501 true Chr2: 1331919-1333419 Arabidopsis thaliana
AT2G04038 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1332420-1333419 Arabidopsis thaliana
AT2G04038 2.0kb upstream 2.0kb upstream 2501 true Chr2: 1329919-1332419 Arabidopsis thaliana
AT2G04038 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1329919-1331918 Arabidopsis thaliana
AT2G04038 2.0kb downstream 2.0kb downstream 2501 true Chr2: 1331919-1334419 Arabidopsis thaliana
AT2G04038 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1332420-1334419 Arabidopsis thaliana
AT2G04038 5.0kb upstream 5.0kb upstream 5501 true Chr2: 1326919-1332419 Arabidopsis thaliana
AT2G04038 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1326919-1331918 Arabidopsis thaliana
AT2G04038 5.0kb downstream 5.0kb downstream 5501 true Chr2: 1331919-1337419 Arabidopsis thaliana
AT2G04038 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1332420-1337419 Arabidopsis thaliana
AT2G04038 10.0kb upstream 10.0kb upstream 10501 true Chr2: 1321919-1332419 Arabidopsis thaliana
AT2G04038 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1321919-1331918 Arabidopsis thaliana
AT2G04038 10.0kb downstream 10.0kb downstream 10501 true Chr2: 1331919-1342419 Arabidopsis thaliana
AT2G04038 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1332420-1342419 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375478 5261 Brassicaceae View MSA
123840763 5264 Brassicales-Malvales View MSA
124338284 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low Low
cufflinks 4.222        
cufflinks 0.066     Low  
cufflinks 9.986       High
cufflinks 0.16     Low  
cufflinks 1.001        

0 Strain