Gene : AT2G21520 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23324//PTHR23324:SF43 - SEC14 RELATED PROTEIN // PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH6-RELATED Genomic Order:  1411
Name:  ? AT2G21520 Secondary Identifier:  ? PAC:19643589
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21520 0.5kb upstream 0.5kb upstream 4190 true Chr2: 9215019-9219208 Arabidopsis thaliana
AT2G21520 0.5kb upstream 0.5kb upstream 500 false Chr2: 9215019-9215518 Arabidopsis thaliana
AT2G21520 0.5kb downstream 0.5kb downstream 4190 true Chr2: 9215519-9219708 Arabidopsis thaliana
AT2G21520 0.5kb downstream 0.5kb downstream 500 false Chr2: 9219209-9219708 Arabidopsis thaliana
AT2G21520 1.0kb upstream 1.0kb upstream 4690 true Chr2: 9214519-9219208 Arabidopsis thaliana
AT2G21520 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9214519-9215518 Arabidopsis thaliana
AT2G21520 1.0kb downstream 1.0kb downstream 4690 true Chr2: 9215519-9220208 Arabidopsis thaliana
AT2G21520 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9219209-9220208 Arabidopsis thaliana
AT2G21520 2.0kb upstream 2.0kb upstream 5690 true Chr2: 9213519-9219208 Arabidopsis thaliana
AT2G21520 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9213519-9215518 Arabidopsis thaliana
AT2G21520 2.0kb downstream 2.0kb downstream 5690 true Chr2: 9215519-9221208 Arabidopsis thaliana
AT2G21520 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9219209-9221208 Arabidopsis thaliana
AT2G21520 5.0kb upstream 5.0kb upstream 8690 true Chr2: 9210519-9219208 Arabidopsis thaliana
AT2G21520 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9210519-9215518 Arabidopsis thaliana
AT2G21520 5.0kb downstream 5.0kb downstream 8690 true Chr2: 9215519-9224208 Arabidopsis thaliana
AT2G21520 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9219209-9224208 Arabidopsis thaliana
AT2G21520 10.0kb upstream 10.0kb upstream 13690 true Chr2: 9205519-9219208 Arabidopsis thaliana
AT2G21520 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9205519-9215518 Arabidopsis thaliana
AT2G21520 10.0kb downstream 10.0kb downstream 13690 true Chr2: 9215519-9229208 Arabidopsis thaliana
AT2G21520 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9219209-9229208 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364926 5261 Brassicaceae View MSA
123830692 5264 Brassicales-Malvales View MSA
124342663 5266 SBM View MSA
124237771 5268 Malvidae View MSA
124072499 5270 Rosid View MSA
123739156 5271 Pentapetalae View MSA
122788064 5272 Eudicot View MSA
122044319 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.367        
cufflinks 21.606        
cufflinks 15.986       Low
cufflinks 21.428        
cufflinks 21.241        
cufflinks 18.466        

0 Strain