Gene : pEARLI4 A. thaliana TAIR10
Primary Identifier:  ? AT2G20960 Defline:  (1 of 6) PTHR21704//PTHR21704:SF19 - NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED // EXPRESSED PROTEIN-RELATED
Genomic Order:  1353 Name:  ? AT2G20960
Secondary Identifier:  ? PAC:19642287
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20960 0.5kb upstream 0.5kb upstream 3616 true Chr2: 9006148-9009763 Arabidopsis thaliana
AT2G20960 0.5kb upstream 0.5kb upstream 500 false Chr2: 9006148-9006647 Arabidopsis thaliana
AT2G20960 0.5kb downstream 0.5kb downstream 3616 true Chr2: 9006648-9010263 Arabidopsis thaliana
AT2G20960 0.5kb downstream 0.5kb downstream 500 false Chr2: 9009764-9010263 Arabidopsis thaliana
AT2G20960 1.0kb upstream 1.0kb upstream 4116 true Chr2: 9005648-9009763 Arabidopsis thaliana
AT2G20960 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9005648-9006647 Arabidopsis thaliana
AT2G20960 1.0kb downstream 1.0kb downstream 4116 true Chr2: 9006648-9010763 Arabidopsis thaliana
AT2G20960 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9009764-9010763 Arabidopsis thaliana
AT2G20960 2.0kb upstream 2.0kb upstream 5116 true Chr2: 9004648-9009763 Arabidopsis thaliana
AT2G20960 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9004648-9006647 Arabidopsis thaliana
AT2G20960 2.0kb downstream 2.0kb downstream 5116 true Chr2: 9006648-9011763 Arabidopsis thaliana
AT2G20960 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9009764-9011763 Arabidopsis thaliana
AT2G20960 5.0kb upstream 5.0kb upstream 8116 true Chr2: 9001648-9009763 Arabidopsis thaliana
AT2G20960 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9001648-9006647 Arabidopsis thaliana
AT2G20960 5.0kb downstream 5.0kb downstream 8116 true Chr2: 9006648-9014763 Arabidopsis thaliana
AT2G20960 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9009764-9014763 Arabidopsis thaliana
AT2G20960 10.0kb upstream 10.0kb upstream 13116 true Chr2: 8996648-9009763 Arabidopsis thaliana
AT2G20960 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8996648-9006647 Arabidopsis thaliana
AT2G20960 10.0kb downstream 10.0kb downstream 13116 true Chr2: 9006648-9019763 Arabidopsis thaliana
AT2G20960 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9009764-9019763 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376600 5261 Brassicaceae View MSA
123801304 5264 Brassicales-Malvales View MSA
124298626 5266 SBM View MSA
124245139 5268 Malvidae View MSA
124050567 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.509     High High
cufflinks 4.696       Low
cufflinks 30.757     High  
cufflinks 8.525        
cufflinks 36.507     High  
cufflinks 4.616       Low

0 Strain