Gene : AT2G20950 A. thaliana TAIR10
Defline:  (1 of 6) PTHR21704//PTHR21704:SF19 - NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED // EXPRESSED PROTEIN-RELATED Genomic Order:  1352
Name:  ? AT2G20950 Secondary Identifier:  ? PAC:19643558
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20950 0.5kb upstream 0.5kb upstream 3304 true Chr2: 9002635-9005938 Arabidopsis thaliana
AT2G20950 0.5kb upstream 0.5kb upstream 500 false Chr2: 9002635-9003134 Arabidopsis thaliana
AT2G20950 0.5kb downstream 0.5kb downstream 3304 true Chr2: 9003135-9006438 Arabidopsis thaliana
AT2G20950 0.5kb downstream 0.5kb downstream 500 false Chr2: 9005939-9006438 Arabidopsis thaliana
AT2G20950 1.0kb upstream 1.0kb upstream 3804 true Chr2: 9002135-9005938 Arabidopsis thaliana
AT2G20950 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9002135-9003134 Arabidopsis thaliana
AT2G20950 1.0kb downstream 1.0kb downstream 3804 true Chr2: 9003135-9006938 Arabidopsis thaliana
AT2G20950 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9005939-9006938 Arabidopsis thaliana
AT2G20950 2.0kb upstream 2.0kb upstream 4804 true Chr2: 9001135-9005938 Arabidopsis thaliana
AT2G20950 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9001135-9003134 Arabidopsis thaliana
AT2G20950 2.0kb downstream 2.0kb downstream 4804 true Chr2: 9003135-9007938 Arabidopsis thaliana
AT2G20950 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9005939-9007938 Arabidopsis thaliana
AT2G20950 5.0kb upstream 5.0kb upstream 7804 true Chr2: 8998135-9005938 Arabidopsis thaliana
AT2G20950 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8998135-9003134 Arabidopsis thaliana
AT2G20950 5.0kb downstream 5.0kb downstream 7804 true Chr2: 9003135-9010938 Arabidopsis thaliana
AT2G20950 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9005939-9010938 Arabidopsis thaliana
AT2G20950 10.0kb upstream 10.0kb upstream 12804 true Chr2: 8993135-9005938 Arabidopsis thaliana
AT2G20950 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8993135-9003134 Arabidopsis thaliana
AT2G20950 10.0kb downstream 10.0kb downstream 12804 true Chr2: 9003135-9015938 Arabidopsis thaliana
AT2G20950 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9005939-9015938 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369667 5261 Brassicaceae View MSA
123799821 5264 Brassicales-Malvales View MSA
124297303 5266 SBM View MSA
124245139 5268 Malvidae View MSA
124050567 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.622        
cufflinks 3.75       High
cufflinks 1.848       Low
cufflinks 3.895       High
cufflinks 2.184        
cufflinks 2.888        

0 Strain