Gene : SRF1 A. thaliana TAIR10
Primary Identifier:  ? AT2G20850 Defline:  (1 of 3) PTHR27001//PTHR27001:SF91 - FAMILY NOT NAMED // PROTEIN STRUBBELIG-RELATED
Genomic Order:  1341 Name:  ? AT2G20850
Secondary Identifier:  ? PAC:19639158
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20850 0.5kb upstream 0.5kb upstream 4532 true Chr2: 8975348-8979879 Arabidopsis thaliana
AT2G20850 0.5kb upstream 0.5kb upstream 500 false Chr2: 8979380-8979879 Arabidopsis thaliana
AT2G20850 0.5kb downstream 0.5kb downstream 4532 true Chr2: 8974848-8979379 Arabidopsis thaliana
AT2G20850 0.5kb downstream 0.5kb downstream 500 false Chr2: 8974848-8975347 Arabidopsis thaliana
AT2G20850 1.0kb upstream 1.0kb upstream 5032 true Chr2: 8975348-8980379 Arabidopsis thaliana
AT2G20850 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8979380-8980379 Arabidopsis thaliana
AT2G20850 1.0kb downstream 1.0kb downstream 5032 true Chr2: 8974348-8979379 Arabidopsis thaliana
AT2G20850 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8974348-8975347 Arabidopsis thaliana
AT2G20850 2.0kb upstream 2.0kb upstream 6032 true Chr2: 8975348-8981379 Arabidopsis thaliana
AT2G20850 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8979380-8981379 Arabidopsis thaliana
AT2G20850 2.0kb downstream 2.0kb downstream 6032 true Chr2: 8973348-8979379 Arabidopsis thaliana
AT2G20850 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8973348-8975347 Arabidopsis thaliana
AT2G20850 5.0kb upstream 5.0kb upstream 9032 true Chr2: 8975348-8984379 Arabidopsis thaliana
AT2G20850 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8979380-8984379 Arabidopsis thaliana
AT2G20850 5.0kb downstream 5.0kb downstream 9032 true Chr2: 8970348-8979379 Arabidopsis thaliana
AT2G20850 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8970348-8975347 Arabidopsis thaliana
AT2G20850 10.0kb upstream 10.0kb upstream 14032 true Chr2: 8975348-8989379 Arabidopsis thaliana
AT2G20850 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8979380-8989379 Arabidopsis thaliana
AT2G20850 10.0kb downstream 10.0kb downstream 14032 true Chr2: 8965348-8979379 Arabidopsis thaliana
AT2G20850 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8965348-8975347 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344123 5261 Brassicaceae View MSA
123841080 5264 Brassicales-Malvales View MSA
124348588 5266 SBM View MSA
124250253 5268 Malvidae View MSA
124064785 5270 Rosid View MSA
123746187 5271 Pentapetalae View MSA
122786537 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.511        
cufflinks 24.397       High
cufflinks 7.211        
cufflinks 21.844       High
cufflinks 7.546        
cufflinks 14.046        

0 Strain