Gene : AT2G20680 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1319
Name:  ? AT2G20680 Secondary Identifier:  ? PAC:19638380
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20680 0.5kb upstream 0.5kb upstream 3207 true Chr2: 8919967-8923173 Arabidopsis thaliana
AT2G20680 0.5kb upstream 0.5kb upstream 500 false Chr2: 8919967-8920466 Arabidopsis thaliana
AT2G20680 0.5kb downstream 0.5kb downstream 3207 true Chr2: 8920467-8923673 Arabidopsis thaliana
AT2G20680 0.5kb downstream 0.5kb downstream 500 false Chr2: 8923174-8923673 Arabidopsis thaliana
AT2G20680 1.0kb upstream 1.0kb upstream 3707 true Chr2: 8919467-8923173 Arabidopsis thaliana
AT2G20680 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8919467-8920466 Arabidopsis thaliana
AT2G20680 1.0kb downstream 1.0kb downstream 3707 true Chr2: 8920467-8924173 Arabidopsis thaliana
AT2G20680 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8923174-8924173 Arabidopsis thaliana
AT2G20680 2.0kb upstream 2.0kb upstream 4707 true Chr2: 8918467-8923173 Arabidopsis thaliana
AT2G20680 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8918467-8920466 Arabidopsis thaliana
AT2G20680 2.0kb downstream 2.0kb downstream 4707 true Chr2: 8920467-8925173 Arabidopsis thaliana
AT2G20680 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8923174-8925173 Arabidopsis thaliana
AT2G20680 5.0kb upstream 5.0kb upstream 7707 true Chr2: 8915467-8923173 Arabidopsis thaliana
AT2G20680 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8915467-8920466 Arabidopsis thaliana
AT2G20680 5.0kb downstream 5.0kb downstream 7707 true Chr2: 8920467-8928173 Arabidopsis thaliana
AT2G20680 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8923174-8928173 Arabidopsis thaliana
AT2G20680 10.0kb upstream 10.0kb upstream 12707 true Chr2: 8910467-8923173 Arabidopsis thaliana
AT2G20680 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8910467-8920466 Arabidopsis thaliana
AT2G20680 10.0kb downstream 10.0kb downstream 12707 true Chr2: 8920467-8933173 Arabidopsis thaliana
AT2G20680 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8923174-8933173 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374374 5261 Brassicaceae View MSA
123836398 5264 Brassicales-Malvales View MSA
124336638 5266 SBM View MSA
124250952 5268 Malvidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.626       Low
cufflinks 4.831        
cufflinks 3.895        
cufflinks 4.421        
cufflinks 3.611        
cufflinks 5.056        

0 Strain