Gene : AT2G20500 A. thaliana TAIR10
Genomic Order:  1291 Name:  ? AT2G20500
Secondary Identifier:  ? PAC:19642686
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20500 0.5kb upstream 0.5kb upstream 1425 true Chr2: 8835120-8836544 Arabidopsis thaliana
AT2G20500 0.5kb upstream 0.5kb upstream 500 false Chr2: 8836045-8836544 Arabidopsis thaliana
AT2G20500 0.5kb downstream 0.5kb downstream 1425 true Chr2: 8834620-8836044 Arabidopsis thaliana
AT2G20500 0.5kb downstream 0.5kb downstream 500 false Chr2: 8834620-8835119 Arabidopsis thaliana
AT2G20500 1.0kb upstream 1.0kb upstream 1925 true Chr2: 8835120-8837044 Arabidopsis thaliana
AT2G20500 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8836045-8837044 Arabidopsis thaliana
AT2G20500 1.0kb downstream 1.0kb downstream 1925 true Chr2: 8834120-8836044 Arabidopsis thaliana
AT2G20500 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8834120-8835119 Arabidopsis thaliana
AT2G20500 2.0kb upstream 2.0kb upstream 2925 true Chr2: 8835120-8838044 Arabidopsis thaliana
AT2G20500 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8836045-8838044 Arabidopsis thaliana
AT2G20500 2.0kb downstream 2.0kb downstream 2925 true Chr2: 8833120-8836044 Arabidopsis thaliana
AT2G20500 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8833120-8835119 Arabidopsis thaliana
AT2G20500 5.0kb upstream 5.0kb upstream 5925 true Chr2: 8835120-8841044 Arabidopsis thaliana
AT2G20500 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8836045-8841044 Arabidopsis thaliana
AT2G20500 5.0kb downstream 5.0kb downstream 5925 true Chr2: 8830120-8836044 Arabidopsis thaliana
AT2G20500 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8830120-8835119 Arabidopsis thaliana
AT2G20500 10.0kb upstream 10.0kb upstream 10925 true Chr2: 8835120-8846044 Arabidopsis thaliana
AT2G20500 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8836045-8846044 Arabidopsis thaliana
AT2G20500 10.0kb downstream 10.0kb downstream 10925 true Chr2: 8825120-8836044 Arabidopsis thaliana
AT2G20500 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8825120-8835119 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360658 5261 Brassicaceae View MSA
123797999 5264 Brassicales-Malvales View MSA
124295689 5266 SBM View MSA
124148061 5268 Malvidae View MSA
124070799 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.839        
cufflinks 11.992       High
cufflinks 3.383       Low
cufflinks 10.213        
cufflinks 3.903       Low
cufflinks 9.814        

0 Strain