Gene : AT2G20320 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15288//PTHR15288:SF0 - SUPPRESSION OF TUMORIGENICITY 5 ST5 // DENN DOMAIN-CONTAINING PROTEIN Genomic Order:  1269
Name:  ? AT2G20320 Secondary Identifier:  ? PAC:19638452
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20320 0.5kb upstream 0.5kb upstream 6353 true Chr2: 8766239-8772591 Arabidopsis thaliana
AT2G20320 0.5kb upstream 0.5kb upstream 500 false Chr2: 8766239-8766738 Arabidopsis thaliana
AT2G20320 0.5kb downstream 0.5kb downstream 6353 true Chr2: 8766739-8773091 Arabidopsis thaliana
AT2G20320 0.5kb downstream 0.5kb downstream 500 false Chr2: 8772592-8773091 Arabidopsis thaliana
AT2G20320 1.0kb upstream 1.0kb upstream 6853 true Chr2: 8765739-8772591 Arabidopsis thaliana
AT2G20320 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8765739-8766738 Arabidopsis thaliana
AT2G20320 1.0kb downstream 1.0kb downstream 6853 true Chr2: 8766739-8773591 Arabidopsis thaliana
AT2G20320 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8772592-8773591 Arabidopsis thaliana
AT2G20320 2.0kb upstream 2.0kb upstream 7853 true Chr2: 8764739-8772591 Arabidopsis thaliana
AT2G20320 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8764739-8766738 Arabidopsis thaliana
AT2G20320 2.0kb downstream 2.0kb downstream 7853 true Chr2: 8766739-8774591 Arabidopsis thaliana
AT2G20320 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8772592-8774591 Arabidopsis thaliana
AT2G20320 5.0kb upstream 5.0kb upstream 10853 true Chr2: 8761739-8772591 Arabidopsis thaliana
AT2G20320 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8761739-8766738 Arabidopsis thaliana
AT2G20320 5.0kb downstream 5.0kb downstream 10853 true Chr2: 8766739-8777591 Arabidopsis thaliana
AT2G20320 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8772592-8777591 Arabidopsis thaliana
AT2G20320 10.0kb upstream 10.0kb upstream 15853 true Chr2: 8756739-8772591 Arabidopsis thaliana
AT2G20320 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8756739-8766738 Arabidopsis thaliana
AT2G20320 10.0kb downstream 10.0kb downstream 15853 true Chr2: 8766739-8782591 Arabidopsis thaliana
AT2G20320 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8772592-8782591 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375891 5261 Brassicaceae View MSA
123829230 5264 Brassicales-Malvales View MSA
124345325 5266 SBM View MSA
124242889 5268 Malvidae View MSA
124069833 5270 Rosid View MSA
123750815 5271 Pentapetalae View MSA
122793034 5272 Eudicot View MSA
122046513 5273 Angiosperm View MSA
121343794 5274 Embryophyte View MSA
123425012 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.971        
cufflinks 5.454        
cufflinks 2.912       Low
cufflinks 6.272       High
cufflinks 3.105       Low
cufflinks 5.125        

0 Strain