Gene : AT2G20030 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  1242
Name:  ? AT2G20030 Secondary Identifier:  ? PAC:19638851
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20030 0.5kb upstream 0.5kb upstream 1673 true Chr2: 8647313-8648985 Arabidopsis thaliana
AT2G20030 0.5kb upstream 0.5kb upstream 500 false Chr2: 8647313-8647812 Arabidopsis thaliana
AT2G20030 0.5kb downstream 0.5kb downstream 1673 true Chr2: 8647813-8649485 Arabidopsis thaliana
AT2G20030 0.5kb downstream 0.5kb downstream 500 false Chr2: 8648986-8649485 Arabidopsis thaliana
AT2G20030 1.0kb upstream 1.0kb upstream 2173 true Chr2: 8646813-8648985 Arabidopsis thaliana
AT2G20030 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8646813-8647812 Arabidopsis thaliana
AT2G20030 1.0kb downstream 1.0kb downstream 2173 true Chr2: 8647813-8649985 Arabidopsis thaliana
AT2G20030 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8648986-8649985 Arabidopsis thaliana
AT2G20030 2.0kb upstream 2.0kb upstream 3173 true Chr2: 8645813-8648985 Arabidopsis thaliana
AT2G20030 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8645813-8647812 Arabidopsis thaliana
AT2G20030 2.0kb downstream 2.0kb downstream 3173 true Chr2: 8647813-8650985 Arabidopsis thaliana
AT2G20030 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8648986-8650985 Arabidopsis thaliana
AT2G20030 5.0kb upstream 5.0kb upstream 6173 true Chr2: 8642813-8648985 Arabidopsis thaliana
AT2G20030 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8642813-8647812 Arabidopsis thaliana
AT2G20030 5.0kb downstream 5.0kb downstream 6173 true Chr2: 8647813-8653985 Arabidopsis thaliana
AT2G20030 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8648986-8653985 Arabidopsis thaliana
AT2G20030 10.0kb upstream 10.0kb upstream 11173 true Chr2: 8637813-8648985 Arabidopsis thaliana
AT2G20030 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8637813-8647812 Arabidopsis thaliana
AT2G20030 10.0kb downstream 10.0kb downstream 11173 true Chr2: 8647813-8658985 Arabidopsis thaliana
AT2G20030 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8648986-8658985 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362167 5261 Brassicaceae View MSA
123798320 5264 Brassicales-Malvales View MSA
124295975 5266 SBM View MSA
124251275 5268 Malvidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.074     Low  
cufflinks 0.386       High
cufflinks 0.071     Low  
cufflinks 0.408     Low High
cufflinks 0.052     Low  
cufflinks 0.08     Low  

0 Strain