Gene : AT2G19240 A. thaliana TAIR10
Defline:  (1 of 3) K18469 - TBC1 domain family member 5 (TBC1D5) Genomic Order:  1163
Name:  ? AT2G19240 Secondary Identifier:  ? PAC:19643254
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G19240 0.5kb upstream 0.5kb upstream 4015 true Chr2: 8349048-8353062 Arabidopsis thaliana
AT2G19240 0.5kb upstream 0.5kb upstream 500 false Chr2: 8352563-8353062 Arabidopsis thaliana
AT2G19240 0.5kb downstream 0.5kb downstream 4015 true Chr2: 8348548-8352562 Arabidopsis thaliana
AT2G19240 0.5kb downstream 0.5kb downstream 500 false Chr2: 8348548-8349047 Arabidopsis thaliana
AT2G19240 1.0kb upstream 1.0kb upstream 4515 true Chr2: 8349048-8353562 Arabidopsis thaliana
AT2G19240 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8352563-8353562 Arabidopsis thaliana
AT2G19240 1.0kb downstream 1.0kb downstream 4515 true Chr2: 8348048-8352562 Arabidopsis thaliana
AT2G19240 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8348048-8349047 Arabidopsis thaliana
AT2G19240 2.0kb upstream 2.0kb upstream 5515 true Chr2: 8349048-8354562 Arabidopsis thaliana
AT2G19240 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8352563-8354562 Arabidopsis thaliana
AT2G19240 2.0kb downstream 2.0kb downstream 5515 true Chr2: 8347048-8352562 Arabidopsis thaliana
AT2G19240 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8347048-8349047 Arabidopsis thaliana
AT2G19240 5.0kb upstream 5.0kb upstream 8515 true Chr2: 8349048-8357562 Arabidopsis thaliana
AT2G19240 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8352563-8357562 Arabidopsis thaliana
AT2G19240 5.0kb downstream 5.0kb downstream 8515 true Chr2: 8344048-8352562 Arabidopsis thaliana
AT2G19240 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8344048-8349047 Arabidopsis thaliana
AT2G19240 10.0kb upstream 10.0kb upstream 13515 true Chr2: 8349048-8362562 Arabidopsis thaliana
AT2G19240 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8352563-8362562 Arabidopsis thaliana
AT2G19240 10.0kb downstream 10.0kb downstream 13515 true Chr2: 8339048-8352562 Arabidopsis thaliana
AT2G19240 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8339048-8349047 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379088 5261 Brassicaceae View MSA
123802093 5264 Brassicales-Malvales View MSA
124299314 5266 SBM View MSA
124150762 5268 Malvidae View MSA
123876323 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.293        
cufflinks 0.813        
cufflinks 0.198     Low Low
cufflinks 1.0       High
cufflinks 0.177     Low Low
cufflinks 0.808        

0 Strain