Gene : LKP2 A. thaliana TAIR10
Primary Identifier:  ? AT2G18915 Defline:  (1 of 1) K12115//K12117 - clock-associated PAS protein ZTL (ZTL) // LOV kelch protein 2 (LKP2)
Genomic Order:  1129 Name:  ? AT2G18915
Secondary Identifier:  ? PAC:19638432
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18915 0.5kb upstream 0.5kb upstream 3412 true Chr2: 8194572-8197983 Arabidopsis thaliana
AT2G18915 0.5kb upstream 0.5kb upstream 500 false Chr2: 8197484-8197983 Arabidopsis thaliana
AT2G18915 0.5kb downstream 0.5kb downstream 3412 true Chr2: 8194072-8197483 Arabidopsis thaliana
AT2G18915 0.5kb downstream 0.5kb downstream 500 false Chr2: 8194072-8194571 Arabidopsis thaliana
AT2G18915 1.0kb upstream 1.0kb upstream 3912 true Chr2: 8194572-8198483 Arabidopsis thaliana
AT2G18915 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8197484-8198483 Arabidopsis thaliana
AT2G18915 1.0kb downstream 1.0kb downstream 3912 true Chr2: 8193572-8197483 Arabidopsis thaliana
AT2G18915 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8193572-8194571 Arabidopsis thaliana
AT2G18915 2.0kb upstream 2.0kb upstream 4912 true Chr2: 8194572-8199483 Arabidopsis thaliana
AT2G18915 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8197484-8199483 Arabidopsis thaliana
AT2G18915 2.0kb downstream 2.0kb downstream 4912 true Chr2: 8192572-8197483 Arabidopsis thaliana
AT2G18915 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8192572-8194571 Arabidopsis thaliana
AT2G18915 5.0kb upstream 5.0kb upstream 7912 true Chr2: 8194572-8202483 Arabidopsis thaliana
AT2G18915 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8197484-8202483 Arabidopsis thaliana
AT2G18915 5.0kb downstream 5.0kb downstream 7912 true Chr2: 8189572-8197483 Arabidopsis thaliana
AT2G18915 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8189572-8194571 Arabidopsis thaliana
AT2G18915 10.0kb upstream 10.0kb upstream 12912 true Chr2: 8194572-8207483 Arabidopsis thaliana
AT2G18915 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8197484-8207483 Arabidopsis thaliana
AT2G18915 10.0kb downstream 10.0kb downstream 12912 true Chr2: 8184572-8197483 Arabidopsis thaliana
AT2G18915 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8184572-8194571 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370639 5261 Brassicaceae View MSA
123839573 5264 Brassicales-Malvales View MSA
124337655 5266 SBM View MSA
124242041 5268 Malvidae View MSA
124068680 5270 Rosid View MSA
123751990 5271 Pentapetalae View MSA
122789390 5272 Eudicot View MSA
122047758 5273 Angiosperm View MSA
121310788 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.78        
cufflinks 3.051       Low
cufflinks 3.211        
cufflinks 3.746        
cufflinks 3.998       High
cufflinks 3.125        

0 Strain