Gene : AT2G18540 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31189//PTHR31189:SF7 - FAMILY NOT NAMED // CUPIN FAMILY PROTEIN Genomic Order:  1091
Name:  ? AT2G18540 Secondary Identifier:  ? PAC:19640387
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18540 0.5kb upstream 0.5kb upstream 3127 true Chr2: 8042382-8045508 Arabidopsis thaliana
AT2G18540 0.5kb upstream 0.5kb upstream 500 false Chr2: 8045009-8045508 Arabidopsis thaliana
AT2G18540 0.5kb downstream 0.5kb downstream 3127 true Chr2: 8041882-8045008 Arabidopsis thaliana
AT2G18540 0.5kb downstream 0.5kb downstream 500 false Chr2: 8041882-8042381 Arabidopsis thaliana
AT2G18540 1.0kb upstream 1.0kb upstream 3627 true Chr2: 8042382-8046008 Arabidopsis thaliana
AT2G18540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8045009-8046008 Arabidopsis thaliana
AT2G18540 1.0kb downstream 1.0kb downstream 3627 true Chr2: 8041382-8045008 Arabidopsis thaliana
AT2G18540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8041382-8042381 Arabidopsis thaliana
AT2G18540 2.0kb upstream 2.0kb upstream 4627 true Chr2: 8042382-8047008 Arabidopsis thaliana
AT2G18540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8045009-8047008 Arabidopsis thaliana
AT2G18540 2.0kb downstream 2.0kb downstream 4627 true Chr2: 8040382-8045008 Arabidopsis thaliana
AT2G18540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8040382-8042381 Arabidopsis thaliana
AT2G18540 5.0kb upstream 5.0kb upstream 7627 true Chr2: 8042382-8050008 Arabidopsis thaliana
AT2G18540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8045009-8050008 Arabidopsis thaliana
AT2G18540 5.0kb downstream 5.0kb downstream 7627 true Chr2: 8037382-8045008 Arabidopsis thaliana
AT2G18540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8037382-8042381 Arabidopsis thaliana
AT2G18540 10.0kb upstream 10.0kb upstream 12627 true Chr2: 8042382-8055008 Arabidopsis thaliana
AT2G18540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8045009-8055008 Arabidopsis thaliana
AT2G18540 10.0kb downstream 10.0kb downstream 12627 true Chr2: 8032382-8045008 Arabidopsis thaliana
AT2G18540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8032382-8042381 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367603 5261 Brassicaceae View MSA
123838683 5264 Brassicales-Malvales View MSA
124339263 5266 SBM View MSA
124237600 5268 Malvidae View MSA
124064948 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.011     Low  
cufflinks 0.012     Low  
cufflinks 0.025     Low High
cufflinks 0.006     Low  

0 Strain