Gene : AT2G18690 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  1105
Name:  ? AT2G18690 Secondary Identifier:  ? PAC:19639097
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18690 0.5kb upstream 0.5kb upstream 1908 true Chr2: 8096920-8098827 Arabidopsis thaliana
AT2G18690 0.5kb upstream 0.5kb upstream 500 false Chr2: 8096920-8097419 Arabidopsis thaliana
AT2G18690 0.5kb downstream 0.5kb downstream 1908 true Chr2: 8097420-8099327 Arabidopsis thaliana
AT2G18690 0.5kb downstream 0.5kb downstream 500 false Chr2: 8098828-8099327 Arabidopsis thaliana
AT2G18690 1.0kb upstream 1.0kb upstream 2408 true Chr2: 8096420-8098827 Arabidopsis thaliana
AT2G18690 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8096420-8097419 Arabidopsis thaliana
AT2G18690 1.0kb downstream 1.0kb downstream 2408 true Chr2: 8097420-8099827 Arabidopsis thaliana
AT2G18690 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8098828-8099827 Arabidopsis thaliana
AT2G18690 2.0kb upstream 2.0kb upstream 3408 true Chr2: 8095420-8098827 Arabidopsis thaliana
AT2G18690 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8095420-8097419 Arabidopsis thaliana
AT2G18690 2.0kb downstream 2.0kb downstream 3408 true Chr2: 8097420-8100827 Arabidopsis thaliana
AT2G18690 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8098828-8100827 Arabidopsis thaliana
AT2G18690 5.0kb upstream 5.0kb upstream 6408 true Chr2: 8092420-8098827 Arabidopsis thaliana
AT2G18690 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8092420-8097419 Arabidopsis thaliana
AT2G18690 5.0kb downstream 5.0kb downstream 6408 true Chr2: 8097420-8103827 Arabidopsis thaliana
AT2G18690 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8098828-8103827 Arabidopsis thaliana
AT2G18690 10.0kb upstream 10.0kb upstream 11408 true Chr2: 8087420-8098827 Arabidopsis thaliana
AT2G18690 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8087420-8097419 Arabidopsis thaliana
AT2G18690 10.0kb downstream 10.0kb downstream 11408 true Chr2: 8097420-8108827 Arabidopsis thaliana
AT2G18690 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8098828-8108827 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.912     High High
cufflinks 8.606        
cufflinks 9.76        
cufflinks 20.345        
cufflinks 16.924        
cufflinks 14.482        

0 Strain