Gene : AT2G18620 A. thaliana TAIR10
Defline:  (1 of 12) 2.5.1.1//2.5.1.10//2.5.1.29 - Dimethylallyltranstransferase / Prenyltransferase // (2E,6E)-farnesyl diphosphate synthase / Geranyltranstransferase // Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  1098
Name:  ? AT2G18620 Secondary Identifier:  ? PAC:19643263
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5120 Arabidopsis thaliana pathologic  
Athaliana PWY-5122 Arabidopsis thaliana pathologic  
Athaliana PWY-5123 Arabidopsis thaliana pathologic  
Athaliana PWY-5910 Arabidopsis thaliana pathologic  
Athaliana PWY-7709 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18620 0.5kb upstream 0.5kb upstream 1573 true Chr2: 8077788-8079360 Arabidopsis thaliana
AT2G18620 0.5kb upstream 0.5kb upstream 500 false Chr2: 8077788-8078287 Arabidopsis thaliana
AT2G18620 0.5kb downstream 0.5kb downstream 1573 true Chr2: 8078288-8079860 Arabidopsis thaliana
AT2G18620 0.5kb downstream 0.5kb downstream 500 false Chr2: 8079361-8079860 Arabidopsis thaliana
AT2G18620 1.0kb upstream 1.0kb upstream 2073 true Chr2: 8077288-8079360 Arabidopsis thaliana
AT2G18620 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8077288-8078287 Arabidopsis thaliana
AT2G18620 1.0kb downstream 1.0kb downstream 2073 true Chr2: 8078288-8080360 Arabidopsis thaliana
AT2G18620 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8079361-8080360 Arabidopsis thaliana
AT2G18620 2.0kb upstream 2.0kb upstream 3073 true Chr2: 8076288-8079360 Arabidopsis thaliana
AT2G18620 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8076288-8078287 Arabidopsis thaliana
AT2G18620 2.0kb downstream 2.0kb downstream 3073 true Chr2: 8078288-8081360 Arabidopsis thaliana
AT2G18620 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8079361-8081360 Arabidopsis thaliana
AT2G18620 5.0kb upstream 5.0kb upstream 6073 true Chr2: 8073288-8079360 Arabidopsis thaliana
AT2G18620 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8073288-8078287 Arabidopsis thaliana
AT2G18620 5.0kb downstream 5.0kb downstream 6073 true Chr2: 8078288-8084360 Arabidopsis thaliana
AT2G18620 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8079361-8084360 Arabidopsis thaliana
AT2G18620 10.0kb upstream 10.0kb upstream 11073 true Chr2: 8068288-8079360 Arabidopsis thaliana
AT2G18620 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8068288-8078287 Arabidopsis thaliana
AT2G18620 10.0kb downstream 10.0kb downstream 11073 true Chr2: 8078288-8089360 Arabidopsis thaliana
AT2G18620 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8079361-8089360 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378951 5261 Brassicaceae View MSA
123840424 5264 Brassicales-Malvales View MSA
124338716 5266 SBM View MSA
124237101 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.214     Low  
cufflinks 3.171        
cufflinks 0.253     Low  
cufflinks 2.568        
cufflinks 0.067     Low Low
cufflinks 8.147       High

0 Strain