Gene : HB21 A. thaliana TAIR10
Primary Identifier:  ? AT2G18550 Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED
Genomic Order:  1092 Name:  ? AT2G18550
Secondary Identifier:  ? PAC:19641256
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18550 0.5kb upstream 0.5kb upstream 2051 true Chr2: 8049663-8051713 Arabidopsis thaliana
AT2G18550 0.5kb upstream 0.5kb upstream 500 false Chr2: 8051214-8051713 Arabidopsis thaliana
AT2G18550 0.5kb downstream 0.5kb downstream 2051 true Chr2: 8049163-8051213 Arabidopsis thaliana
AT2G18550 0.5kb downstream 0.5kb downstream 500 false Chr2: 8049163-8049662 Arabidopsis thaliana
AT2G18550 1.0kb upstream 1.0kb upstream 2551 true Chr2: 8049663-8052213 Arabidopsis thaliana
AT2G18550 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8051214-8052213 Arabidopsis thaliana
AT2G18550 1.0kb downstream 1.0kb downstream 2551 true Chr2: 8048663-8051213 Arabidopsis thaliana
AT2G18550 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8048663-8049662 Arabidopsis thaliana
AT2G18550 2.0kb upstream 2.0kb upstream 3551 true Chr2: 8049663-8053213 Arabidopsis thaliana
AT2G18550 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8051214-8053213 Arabidopsis thaliana
AT2G18550 2.0kb downstream 2.0kb downstream 3551 true Chr2: 8047663-8051213 Arabidopsis thaliana
AT2G18550 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8047663-8049662 Arabidopsis thaliana
AT2G18550 5.0kb upstream 5.0kb upstream 6551 true Chr2: 8049663-8056213 Arabidopsis thaliana
AT2G18550 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8051214-8056213 Arabidopsis thaliana
AT2G18550 5.0kb downstream 5.0kb downstream 6551 true Chr2: 8044663-8051213 Arabidopsis thaliana
AT2G18550 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8044663-8049662 Arabidopsis thaliana
AT2G18550 10.0kb upstream 10.0kb upstream 11551 true Chr2: 8049663-8061213 Arabidopsis thaliana
AT2G18550 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8051214-8061213 Arabidopsis thaliana
AT2G18550 10.0kb downstream 10.0kb downstream 11551 true Chr2: 8039663-8051213 Arabidopsis thaliana
AT2G18550 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8039663-8049662 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368102 5261 Brassicaceae View MSA
123799488 5264 Brassicales-Malvales View MSA
124297004 5266 SBM View MSA
124149005 5268 Malvidae View MSA
123874895 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245     Low  
cufflinks 1.068        
cufflinks 0.11     Low Low
cufflinks 1.996        
cufflinks 0.196     Low  
cufflinks 2.389       High

0 Strain