Gene : AT2G18330 A. thaliana TAIR10
Defline:  (1 of 3) K17681 - ATPase family AAA domain-containing protein 3A/B (ATAD3A_B) Genomic Order:  1071
Name:  ? AT2G18330 Secondary Identifier:  ? PAC:19642957
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18330 0.5kb upstream 0.5kb upstream 3971 true Chr2: 7965135-7969105 Arabidopsis thaliana
AT2G18330 0.5kb upstream 0.5kb upstream 500 false Chr2: 7965135-7965634 Arabidopsis thaliana
AT2G18330 0.5kb downstream 0.5kb downstream 3971 true Chr2: 7965635-7969605 Arabidopsis thaliana
AT2G18330 0.5kb downstream 0.5kb downstream 500 false Chr2: 7969106-7969605 Arabidopsis thaliana
AT2G18330 1.0kb upstream 1.0kb upstream 4471 true Chr2: 7964635-7969105 Arabidopsis thaliana
AT2G18330 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7964635-7965634 Arabidopsis thaliana
AT2G18330 1.0kb downstream 1.0kb downstream 4471 true Chr2: 7965635-7970105 Arabidopsis thaliana
AT2G18330 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7969106-7970105 Arabidopsis thaliana
AT2G18330 2.0kb upstream 2.0kb upstream 5471 true Chr2: 7963635-7969105 Arabidopsis thaliana
AT2G18330 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7963635-7965634 Arabidopsis thaliana
AT2G18330 2.0kb downstream 2.0kb downstream 5471 true Chr2: 7965635-7971105 Arabidopsis thaliana
AT2G18330 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7969106-7971105 Arabidopsis thaliana
AT2G18330 5.0kb upstream 5.0kb upstream 8471 true Chr2: 7960635-7969105 Arabidopsis thaliana
AT2G18330 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7960635-7965634 Arabidopsis thaliana
AT2G18330 5.0kb downstream 5.0kb downstream 8471 true Chr2: 7965635-7974105 Arabidopsis thaliana
AT2G18330 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7969106-7974105 Arabidopsis thaliana
AT2G18330 10.0kb upstream 10.0kb upstream 13471 true Chr2: 7955635-7969105 Arabidopsis thaliana
AT2G18330 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7955635-7965634 Arabidopsis thaliana
AT2G18330 10.0kb downstream 10.0kb downstream 13471 true Chr2: 7965635-7979105 Arabidopsis thaliana
AT2G18330 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7969106-7979105 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365286 5261 Brassicaceae View MSA
123832087 5264 Brassicales-Malvales View MSA
124346721 5266 SBM View MSA
124240410 5268 Malvidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.562        
cufflinks 5.21        
cufflinks 3.462       Low
cufflinks 5.566        
cufflinks 3.213       Low
cufflinks 6.47       High

0 Strain