Gene : AT2G18196 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22814//PTHR22814:SF136 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1056
Name:  ? AT2G18196 Secondary Identifier:  ? PAC:19639141
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18196 0.5kb upstream 0.5kb upstream 2319 true Chr2: 7920508-7922826 Arabidopsis thaliana
AT2G18196 0.5kb upstream 0.5kb upstream 500 false Chr2: 7922327-7922826 Arabidopsis thaliana
AT2G18196 0.5kb downstream 0.5kb downstream 2319 true Chr2: 7920008-7922326 Arabidopsis thaliana
AT2G18196 0.5kb downstream 0.5kb downstream 500 false Chr2: 7920008-7920507 Arabidopsis thaliana
AT2G18196 1.0kb upstream 1.0kb upstream 2819 true Chr2: 7920508-7923326 Arabidopsis thaliana
AT2G18196 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7922327-7923326 Arabidopsis thaliana
AT2G18196 1.0kb downstream 1.0kb downstream 2819 true Chr2: 7919508-7922326 Arabidopsis thaliana
AT2G18196 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7919508-7920507 Arabidopsis thaliana
AT2G18196 2.0kb upstream 2.0kb upstream 3819 true Chr2: 7920508-7924326 Arabidopsis thaliana
AT2G18196 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7922327-7924326 Arabidopsis thaliana
AT2G18196 2.0kb downstream 2.0kb downstream 3819 true Chr2: 7918508-7922326 Arabidopsis thaliana
AT2G18196 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7918508-7920507 Arabidopsis thaliana
AT2G18196 5.0kb upstream 5.0kb upstream 6819 true Chr2: 7920508-7927326 Arabidopsis thaliana
AT2G18196 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7922327-7927326 Arabidopsis thaliana
AT2G18196 5.0kb downstream 5.0kb downstream 6819 true Chr2: 7915508-7922326 Arabidopsis thaliana
AT2G18196 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7915508-7920507 Arabidopsis thaliana
AT2G18196 10.0kb upstream 10.0kb upstream 11819 true Chr2: 7920508-7932326 Arabidopsis thaliana
AT2G18196 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7922327-7932326 Arabidopsis thaliana
AT2G18196 10.0kb downstream 10.0kb downstream 11819 true Chr2: 7910508-7922326 Arabidopsis thaliana
AT2G18196 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7910508-7920507 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362019 5261 Brassicaceae View MSA
123837445 5264 Brassicales-Malvales View MSA
124344325 5266 SBM View MSA
124241558 5268 Malvidae View MSA
124062177 5270 Rosid View MSA
123743604 5271 Pentapetalae View MSA
122788291 5272 Eudicot View MSA
122046308 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.544       Low
cufflinks 24.255        
cufflinks 2.081        
cufflinks 25.589        
cufflinks 1.628        
cufflinks 15.401        

0 Strain