Gene : GATA20 A. thaliana TAIR10
Primary Identifier:  ? AT2G18380 Defline:  (1 of 3) PTHR10071//PTHR10071:SF156 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 18-RELATED
Genomic Order:  1076 Name:  ? AT2G18380
Secondary Identifier:  ? PAC:19641344
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18380 0.5kb upstream 0.5kb upstream 1729 true Chr2: 7982868-7984596 Arabidopsis thaliana
AT2G18380 0.5kb upstream 0.5kb upstream 500 false Chr2: 7984097-7984596 Arabidopsis thaliana
AT2G18380 0.5kb downstream 0.5kb downstream 1729 true Chr2: 7982368-7984096 Arabidopsis thaliana
AT2G18380 0.5kb downstream 0.5kb downstream 500 false Chr2: 7982368-7982867 Arabidopsis thaliana
AT2G18380 1.0kb upstream 1.0kb upstream 2229 true Chr2: 7982868-7985096 Arabidopsis thaliana
AT2G18380 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7984097-7985096 Arabidopsis thaliana
AT2G18380 1.0kb downstream 1.0kb downstream 2229 true Chr2: 7981868-7984096 Arabidopsis thaliana
AT2G18380 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7981868-7982867 Arabidopsis thaliana
AT2G18380 2.0kb upstream 2.0kb upstream 3229 true Chr2: 7982868-7986096 Arabidopsis thaliana
AT2G18380 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7984097-7986096 Arabidopsis thaliana
AT2G18380 2.0kb downstream 2.0kb downstream 3229 true Chr2: 7980868-7984096 Arabidopsis thaliana
AT2G18380 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7980868-7982867 Arabidopsis thaliana
AT2G18380 5.0kb upstream 5.0kb upstream 6229 true Chr2: 7982868-7989096 Arabidopsis thaliana
AT2G18380 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7984097-7989096 Arabidopsis thaliana
AT2G18380 5.0kb downstream 5.0kb downstream 6229 true Chr2: 7977868-7984096 Arabidopsis thaliana
AT2G18380 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7977868-7982867 Arabidopsis thaliana
AT2G18380 10.0kb upstream 10.0kb upstream 11229 true Chr2: 7982868-7994096 Arabidopsis thaliana
AT2G18380 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7984097-7994096 Arabidopsis thaliana
AT2G18380 10.0kb downstream 10.0kb downstream 11229 true Chr2: 7972868-7984096 Arabidopsis thaliana
AT2G18380 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7972868-7982867 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377073 5261 Brassicaceae View MSA
123801434 5264 Brassicales-Malvales View MSA
124298737 5266 SBM View MSA
124150311 5268 Malvidae View MSA
123875949 5270 Rosid View MSA
123459696 5271 Pentapetalae View MSA
122495085 5272 Eudicot View MSA
122046709 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.283        
cufflinks 5.633        
cufflinks 1.149        
cufflinks 5.5        
cufflinks 0.863       Low
cufflinks 4.56        

0 Strain