Gene : AT2G17990 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31161:SF6 - KINECTIN-RELATED PROTEIN Genomic Order:  1033
Name:  ? AT2G17990 Secondary Identifier:  ? PAC:19640043
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17990 0.5kb upstream 0.5kb upstream 2438 true Chr2: 7826317-7828754 Arabidopsis thaliana
AT2G17990 0.5kb upstream 0.5kb upstream 500 false Chr2: 7826317-7826816 Arabidopsis thaliana
AT2G17990 0.5kb downstream 0.5kb downstream 2438 true Chr2: 7826817-7829254 Arabidopsis thaliana
AT2G17990 0.5kb downstream 0.5kb downstream 500 false Chr2: 7828755-7829254 Arabidopsis thaliana
AT2G17990 1.0kb upstream 1.0kb upstream 2938 true Chr2: 7825817-7828754 Arabidopsis thaliana
AT2G17990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7825817-7826816 Arabidopsis thaliana
AT2G17990 1.0kb downstream 1.0kb downstream 2938 true Chr2: 7826817-7829754 Arabidopsis thaliana
AT2G17990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7828755-7829754 Arabidopsis thaliana
AT2G17990 2.0kb upstream 2.0kb upstream 3938 true Chr2: 7824817-7828754 Arabidopsis thaliana
AT2G17990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7824817-7826816 Arabidopsis thaliana
AT2G17990 2.0kb downstream 2.0kb downstream 3938 true Chr2: 7826817-7830754 Arabidopsis thaliana
AT2G17990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7828755-7830754 Arabidopsis thaliana
AT2G17990 5.0kb upstream 5.0kb upstream 6938 true Chr2: 7821817-7828754 Arabidopsis thaliana
AT2G17990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7821817-7826816 Arabidopsis thaliana
AT2G17990 5.0kb downstream 5.0kb downstream 6938 true Chr2: 7826817-7833754 Arabidopsis thaliana
AT2G17990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7828755-7833754 Arabidopsis thaliana
AT2G17990 10.0kb upstream 10.0kb upstream 11938 true Chr2: 7816817-7828754 Arabidopsis thaliana
AT2G17990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7816817-7826816 Arabidopsis thaliana
AT2G17990 10.0kb downstream 10.0kb downstream 11938 true Chr2: 7826817-7838754 Arabidopsis thaliana
AT2G17990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7828755-7838754 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366588 5261 Brassicaceae View MSA
123838569 5264 Brassicales-Malvales View MSA
124345359 5266 SBM View MSA
124239563 5268 Malvidae View MSA
124067949 5270 Rosid View MSA
123741403 5271 Pentapetalae View MSA
122792089 5272 Eudicot View MSA
122046615 5273 Angiosperm View MSA
121343979 5274 Embryophyte View MSA
123379950 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.19     High  
cufflinks 65.163     High High
cufflinks 30.641     High  
cufflinks 63.166     High High
cufflinks 29.372     High Low
cufflinks 51.798     High  

0 Strain