Gene : AT2G17540 A. thaliana TAIR10
Genomic Order:  982 Name:  ? AT2G17540
Secondary Identifier:  ? PAC:19640623
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17540 0.5kb upstream 0.5kb upstream 1993 true Chr2: 7630420-7632412 Arabidopsis thaliana
AT2G17540 0.5kb upstream 0.5kb upstream 500 false Chr2: 7631913-7632412 Arabidopsis thaliana
AT2G17540 0.5kb downstream 0.5kb downstream 1993 true Chr2: 7629920-7631912 Arabidopsis thaliana
AT2G17540 0.5kb downstream 0.5kb downstream 500 false Chr2: 7629920-7630419 Arabidopsis thaliana
AT2G17540 1.0kb upstream 1.0kb upstream 2493 true Chr2: 7630420-7632912 Arabidopsis thaliana
AT2G17540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7631913-7632912 Arabidopsis thaliana
AT2G17540 1.0kb downstream 1.0kb downstream 2493 true Chr2: 7629420-7631912 Arabidopsis thaliana
AT2G17540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7629420-7630419 Arabidopsis thaliana
AT2G17540 2.0kb upstream 2.0kb upstream 3493 true Chr2: 7630420-7633912 Arabidopsis thaliana
AT2G17540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7631913-7633912 Arabidopsis thaliana
AT2G17540 2.0kb downstream 2.0kb downstream 3493 true Chr2: 7628420-7631912 Arabidopsis thaliana
AT2G17540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7628420-7630419 Arabidopsis thaliana
AT2G17540 5.0kb upstream 5.0kb upstream 6493 true Chr2: 7630420-7636912 Arabidopsis thaliana
AT2G17540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7631913-7636912 Arabidopsis thaliana
AT2G17540 5.0kb downstream 5.0kb downstream 6493 true Chr2: 7625420-7631912 Arabidopsis thaliana
AT2G17540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7625420-7630419 Arabidopsis thaliana
AT2G17540 10.0kb upstream 10.0kb upstream 11493 true Chr2: 7630420-7641912 Arabidopsis thaliana
AT2G17540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7631913-7641912 Arabidopsis thaliana
AT2G17540 10.0kb downstream 10.0kb downstream 11493 true Chr2: 7620420-7631912 Arabidopsis thaliana
AT2G17540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7620420-7630419 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026567 5273 Angiosperm View MSA
122371601 5261 Brassicaceae View MSA
123838336 5264 Brassicales-Malvales View MSA
124342602 5266 SBM View MSA
124238658 5268 Malvidae View MSA
124064879 5270 Rosid View MSA
123743574 5271 Pentapetalae View MSA
122787338 5272 Eudicot View MSA
121296393 5274 Embryophyte View MSA
123334564 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.409        
cufflinks 3.699        
cufflinks 6.271       High
cufflinks 4.082        
cufflinks 5.843       High
cufflinks 3.281       Low

0 Strain