Gene : AT2G17530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24055:SF138 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  981
Name:  ? AT2G17530 Secondary Identifier:  ? PAC:19641864
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17530 0.5kb upstream 0.5kb upstream 3292 true Chr2: 7625858-7629149 Arabidopsis thaliana
AT2G17530 0.5kb upstream 0.5kb upstream 500 false Chr2: 7625858-7626357 Arabidopsis thaliana
AT2G17530 0.5kb downstream 0.5kb downstream 3292 true Chr2: 7626358-7629649 Arabidopsis thaliana
AT2G17530 0.5kb downstream 0.5kb downstream 500 false Chr2: 7629150-7629649 Arabidopsis thaliana
AT2G17530 1.0kb upstream 1.0kb upstream 3792 true Chr2: 7625358-7629149 Arabidopsis thaliana
AT2G17530 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7625358-7626357 Arabidopsis thaliana
AT2G17530 1.0kb downstream 1.0kb downstream 3792 true Chr2: 7626358-7630149 Arabidopsis thaliana
AT2G17530 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7629150-7630149 Arabidopsis thaliana
AT2G17530 2.0kb upstream 2.0kb upstream 4792 true Chr2: 7624358-7629149 Arabidopsis thaliana
AT2G17530 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7624358-7626357 Arabidopsis thaliana
AT2G17530 2.0kb downstream 2.0kb downstream 4792 true Chr2: 7626358-7631149 Arabidopsis thaliana
AT2G17530 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7629150-7631149 Arabidopsis thaliana
AT2G17530 5.0kb upstream 5.0kb upstream 7792 true Chr2: 7621358-7629149 Arabidopsis thaliana
AT2G17530 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7621358-7626357 Arabidopsis thaliana
AT2G17530 5.0kb downstream 5.0kb downstream 7792 true Chr2: 7626358-7634149 Arabidopsis thaliana
AT2G17530 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7629150-7634149 Arabidopsis thaliana
AT2G17530 10.0kb upstream 10.0kb upstream 12792 true Chr2: 7616358-7629149 Arabidopsis thaliana
AT2G17530 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7616358-7626357 Arabidopsis thaliana
AT2G17530 10.0kb downstream 10.0kb downstream 12792 true Chr2: 7626358-7639149 Arabidopsis thaliana
AT2G17530 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7629150-7639149 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368953 5261 Brassicaceae View MSA
123840880 5264 Brassicales-Malvales View MSA
124343818 5266 SBM View MSA
124242743 5268 Malvidae View MSA
124072935 5270 Rosid View MSA
123747510 5271 Pentapetalae View MSA
122793634 5272 Eudicot View MSA
122041644 5273 Angiosperm View MSA
121350096 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.038        
cufflinks 4.872       High
cufflinks 2.757        
cufflinks 4.654        
cufflinks 2.584       Low
cufflinks 4.577        

0 Strain