Gene : HMG2 A. thaliana TAIR10
Primary Identifier:  ? AT2G17370 Defline:  (1 of 1) PTHR10572//PTHR10572:SF7 - 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE // 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 2
Genomic Order:  966 Name:  ? AT2G17370
Secondary Identifier:  ? PAC:19643585
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5910 Arabidopsis thaliana pathologic  
Athaliana PWY-922 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17370 0.5kb upstream 0.5kb upstream 2927 true Chr2: 7549275-7552201 Arabidopsis thaliana
AT2G17370 0.5kb upstream 0.5kb upstream 500 false Chr2: 7549275-7549774 Arabidopsis thaliana
AT2G17370 0.5kb downstream 0.5kb downstream 2927 true Chr2: 7549775-7552701 Arabidopsis thaliana
AT2G17370 0.5kb downstream 0.5kb downstream 500 false Chr2: 7552202-7552701 Arabidopsis thaliana
AT2G17370 1.0kb upstream 1.0kb upstream 3427 true Chr2: 7548775-7552201 Arabidopsis thaliana
AT2G17370 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7548775-7549774 Arabidopsis thaliana
AT2G17370 1.0kb downstream 1.0kb downstream 3427 true Chr2: 7549775-7553201 Arabidopsis thaliana
AT2G17370 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7552202-7553201 Arabidopsis thaliana
AT2G17370 2.0kb upstream 2.0kb upstream 4427 true Chr2: 7547775-7552201 Arabidopsis thaliana
AT2G17370 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7547775-7549774 Arabidopsis thaliana
AT2G17370 2.0kb downstream 2.0kb downstream 4427 true Chr2: 7549775-7554201 Arabidopsis thaliana
AT2G17370 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7552202-7554201 Arabidopsis thaliana
AT2G17370 5.0kb upstream 5.0kb upstream 7427 true Chr2: 7544775-7552201 Arabidopsis thaliana
AT2G17370 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7544775-7549774 Arabidopsis thaliana
AT2G17370 5.0kb downstream 5.0kb downstream 7427 true Chr2: 7549775-7557201 Arabidopsis thaliana
AT2G17370 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7552202-7557201 Arabidopsis thaliana
AT2G17370 10.0kb upstream 10.0kb upstream 12427 true Chr2: 7539775-7552201 Arabidopsis thaliana
AT2G17370 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7539775-7549774 Arabidopsis thaliana
AT2G17370 10.0kb downstream 10.0kb downstream 12427 true Chr2: 7549775-7562201 Arabidopsis thaliana
AT2G17370 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7552202-7562201 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377721 5261 Brassicaceae View MSA
123840329 5264 Brassicales-Malvales View MSA
124347727 5266 SBM View MSA
124239533 5268 Malvidae View MSA
124072826 5270 Rosid View MSA
123751436 5271 Pentapetalae View MSA
122791870 5272 Eudicot View MSA
122051392 5273 Angiosperm View MSA
121350752 5274 Embryophyte View MSA
123381875 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.659        
cufflinks 10.264        
cufflinks 3.429        
cufflinks 14.777       High
cufflinks 3.765        
cufflinks 11.394        

0 Strain