Gene : AT2G16990 A. thaliana TAIR10
Defline:  (1 of 3) PTHR23504:SF36 - MAJOR FACILITATOR PROTEIN Genomic Order:  924
Name:  ? AT2G16990 Secondary Identifier:  ? PAC:19640263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G16990 0.5kb upstream 0.5kb upstream 5320 true Chr2: 7382535-7387854 Arabidopsis thaliana
AT2G16990 0.5kb upstream 0.5kb upstream 500 false Chr2: 7382535-7383034 Arabidopsis thaliana
AT2G16990 0.5kb downstream 0.5kb downstream 5320 true Chr2: 7383035-7388354 Arabidopsis thaliana
AT2G16990 0.5kb downstream 0.5kb downstream 500 false Chr2: 7387855-7388354 Arabidopsis thaliana
AT2G16990 1.0kb upstream 1.0kb upstream 5820 true Chr2: 7382035-7387854 Arabidopsis thaliana
AT2G16990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7382035-7383034 Arabidopsis thaliana
AT2G16990 1.0kb downstream 1.0kb downstream 5820 true Chr2: 7383035-7388854 Arabidopsis thaliana
AT2G16990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7387855-7388854 Arabidopsis thaliana
AT2G16990 2.0kb upstream 2.0kb upstream 6820 true Chr2: 7381035-7387854 Arabidopsis thaliana
AT2G16990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7381035-7383034 Arabidopsis thaliana
AT2G16990 2.0kb downstream 2.0kb downstream 6820 true Chr2: 7383035-7389854 Arabidopsis thaliana
AT2G16990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7387855-7389854 Arabidopsis thaliana
AT2G16990 5.0kb upstream 5.0kb upstream 9820 true Chr2: 7378035-7387854 Arabidopsis thaliana
AT2G16990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7378035-7383034 Arabidopsis thaliana
AT2G16990 5.0kb downstream 5.0kb downstream 9820 true Chr2: 7383035-7392854 Arabidopsis thaliana
AT2G16990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7387855-7392854 Arabidopsis thaliana
AT2G16990 10.0kb upstream 10.0kb upstream 14820 true Chr2: 7373035-7387854 Arabidopsis thaliana
AT2G16990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7373035-7383034 Arabidopsis thaliana
AT2G16990 10.0kb downstream 10.0kb downstream 14820 true Chr2: 7383035-7397854 Arabidopsis thaliana
AT2G16990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7387855-7397854 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367345 5261 Brassicaceae View MSA
123837080 5264 Brassicales-Malvales View MSA
124351425 5266 SBM View MSA
124242068 5268 Malvidae View MSA
124071617 5270 Rosid View MSA
123753447 5271 Pentapetalae View MSA
122796821 5272 Eudicot View MSA
122045296 5273 Angiosperm View MSA
121351276 5274 Embryophyte View MSA
123428313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.798       Low
cufflinks 2.597        
cufflinks 1.488        
cufflinks 4.139       High
cufflinks 1.384        
cufflinks 1.122        

0 Strain