Gene : SK20 A. thaliana TAIR10
Primary Identifier:  ? AT2G45950 Defline:  (1 of 2) PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED
Genomic Order:  4014 Name:  ? AT2G45950
Secondary Identifier:  ? PAC:19638139
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45950 0.5kb upstream 0.5kb upstream 3991 true Chr2: 18904324-18908314 Arabidopsis thaliana
AT2G45950 0.5kb upstream 0.5kb upstream 500 false Chr2: 18907815-18908314 Arabidopsis thaliana
AT2G45950 0.5kb downstream 0.5kb downstream 3991 true Chr2: 18903824-18907814 Arabidopsis thaliana
AT2G45950 0.5kb downstream 0.5kb downstream 500 false Chr2: 18903824-18904323 Arabidopsis thaliana
AT2G45950 1.0kb upstream 1.0kb upstream 4491 true Chr2: 18904324-18908814 Arabidopsis thaliana
AT2G45950 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18907815-18908814 Arabidopsis thaliana
AT2G45950 1.0kb downstream 1.0kb downstream 4491 true Chr2: 18903324-18907814 Arabidopsis thaliana
AT2G45950 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18903324-18904323 Arabidopsis thaliana
AT2G45950 2.0kb upstream 2.0kb upstream 5491 true Chr2: 18904324-18909814 Arabidopsis thaliana
AT2G45950 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18907815-18909814 Arabidopsis thaliana
AT2G45950 2.0kb downstream 2.0kb downstream 5491 true Chr2: 18902324-18907814 Arabidopsis thaliana
AT2G45950 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18902324-18904323 Arabidopsis thaliana
AT2G45950 5.0kb upstream 5.0kb upstream 8491 true Chr2: 18904324-18912814 Arabidopsis thaliana
AT2G45950 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18907815-18912814 Arabidopsis thaliana
AT2G45950 5.0kb downstream 5.0kb downstream 8491 true Chr2: 18899324-18907814 Arabidopsis thaliana
AT2G45950 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18899324-18904323 Arabidopsis thaliana
AT2G45950 10.0kb upstream 10.0kb upstream 13491 true Chr2: 18904324-18917814 Arabidopsis thaliana
AT2G45950 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18907815-18917814 Arabidopsis thaliana
AT2G45950 10.0kb downstream 10.0kb downstream 13491 true Chr2: 18894324-18907814 Arabidopsis thaliana
AT2G45950 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18894324-18904323 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122361301 5261 Brassicaceae View MSA
123798133 5264 Brassicales-Malvales View MSA
124295808 5266 SBM View MSA
124247968 5268 Malvidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.347        
cufflinks 2.252        
cufflinks 2.608       High
cufflinks 2.367        
cufflinks 2.282        
cufflinks 1.853       Low

0 Strain