Gene : BRM A. thaliana TAIR10
Primary Identifier:  ? AT2G46020 Defline:  (1 of 1) PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A
Genomic Order:  4020 Name:  ? AT2G46020
Secondary Identifier:  ? PAC:19640605
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46020 0.5kb upstream 0.5kb upstream 9131 true Chr2: 18922804-18931934 Arabidopsis thaliana
AT2G46020 0.5kb upstream 0.5kb upstream 500 false Chr2: 18922804-18923303 Arabidopsis thaliana
AT2G46020 0.5kb downstream 0.5kb downstream 9131 true Chr2: 18923304-18932434 Arabidopsis thaliana
AT2G46020 0.5kb downstream 0.5kb downstream 500 false Chr2: 18931935-18932434 Arabidopsis thaliana
AT2G46020 1.0kb upstream 1.0kb upstream 9631 true Chr2: 18922304-18931934 Arabidopsis thaliana
AT2G46020 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18922304-18923303 Arabidopsis thaliana
AT2G46020 1.0kb downstream 1.0kb downstream 9631 true Chr2: 18923304-18932934 Arabidopsis thaliana
AT2G46020 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18931935-18932934 Arabidopsis thaliana
AT2G46020 2.0kb upstream 2.0kb upstream 10631 true Chr2: 18921304-18931934 Arabidopsis thaliana
AT2G46020 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18921304-18923303 Arabidopsis thaliana
AT2G46020 2.0kb downstream 2.0kb downstream 10631 true Chr2: 18923304-18933934 Arabidopsis thaliana
AT2G46020 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18931935-18933934 Arabidopsis thaliana
AT2G46020 5.0kb upstream 5.0kb upstream 13631 true Chr2: 18918304-18931934 Arabidopsis thaliana
AT2G46020 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18918304-18923303 Arabidopsis thaliana
AT2G46020 5.0kb downstream 5.0kb downstream 13631 true Chr2: 18923304-18936934 Arabidopsis thaliana
AT2G46020 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18931935-18936934 Arabidopsis thaliana
AT2G46020 10.0kb upstream 10.0kb upstream 18631 true Chr2: 18913304-18931934 Arabidopsis thaliana
AT2G46020 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18913304-18923303 Arabidopsis thaliana
AT2G46020 10.0kb downstream 10.0kb downstream 18631 true Chr2: 18923304-18941934 Arabidopsis thaliana
AT2G46020 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18931935-18941934 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377449 5261 Brassicaceae View MSA
123839207 5264 Brassicales-Malvales View MSA
124350968 5266 SBM View MSA
124246961 5268 Malvidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.291        
cufflinks 11.4        
cufflinks 6.586       Low
cufflinks 12.507        
cufflinks 7.393        
cufflinks 12.04        

0 Strain