Gene : AT2G45700 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23240//PTHR23240:SF10 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3990
Name:  ? AT2G45700 Secondary Identifier:  ? PAC:19640216
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45700 0.5kb upstream 0.5kb upstream 4029 true Chr2: 18827000-18831028 Arabidopsis thaliana
AT2G45700 0.5kb upstream 0.5kb upstream 500 false Chr2: 18830529-18831028 Arabidopsis thaliana
AT2G45700 0.5kb downstream 0.5kb downstream 4029 true Chr2: 18826500-18830528 Arabidopsis thaliana
AT2G45700 0.5kb downstream 0.5kb downstream 500 false Chr2: 18826500-18826999 Arabidopsis thaliana
AT2G45700 1.0kb upstream 1.0kb upstream 4529 true Chr2: 18827000-18831528 Arabidopsis thaliana
AT2G45700 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18830529-18831528 Arabidopsis thaliana
AT2G45700 1.0kb downstream 1.0kb downstream 4529 true Chr2: 18826000-18830528 Arabidopsis thaliana
AT2G45700 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18826000-18826999 Arabidopsis thaliana
AT2G45700 2.0kb upstream 2.0kb upstream 5529 true Chr2: 18827000-18832528 Arabidopsis thaliana
AT2G45700 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18830529-18832528 Arabidopsis thaliana
AT2G45700 2.0kb downstream 2.0kb downstream 5529 true Chr2: 18825000-18830528 Arabidopsis thaliana
AT2G45700 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18825000-18826999 Arabidopsis thaliana
AT2G45700 5.0kb upstream 5.0kb upstream 8529 true Chr2: 18827000-18835528 Arabidopsis thaliana
AT2G45700 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18830529-18835528 Arabidopsis thaliana
AT2G45700 5.0kb downstream 5.0kb downstream 8529 true Chr2: 18822000-18830528 Arabidopsis thaliana
AT2G45700 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18822000-18826999 Arabidopsis thaliana
AT2G45700 10.0kb upstream 10.0kb upstream 13529 true Chr2: 18827000-18840528 Arabidopsis thaliana
AT2G45700 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18830529-18840528 Arabidopsis thaliana
AT2G45700 10.0kb downstream 10.0kb downstream 13529 true Chr2: 18817000-18830528 Arabidopsis thaliana
AT2G45700 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18817000-18826999 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365353 5261 Brassicaceae View MSA
123832083 5264 Brassicales-Malvales View MSA
124343513 5266 SBM View MSA
124240689 5268 Malvidae View MSA
124066680 5270 Rosid View MSA
123739588 5271 Pentapetalae View MSA
122791348 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.602        
cufflinks 13.068        
cufflinks 7.474        
cufflinks 13.375       High
cufflinks 7.124       Low
cufflinks 12.257        

0 Strain