Gene : GCP1 A. thaliana TAIR10
Primary Identifier:  ? AT2G45270 Defline:  (1 of 1) PTHR11735//PTHR11735:SF12 - O-SIALOGLYCOPROTEIN ENDOPEPTIDASE // TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED
Genomic Order:  3944 Name:  ? AT2G45270
Secondary Identifier:  ? PAC:19640156
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1587 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45270 0.5kb upstream 0.5kb upstream 3848 true Chr2: 18666026-18669873 Arabidopsis thaliana
AT2G45270 0.5kb upstream 0.5kb upstream 500 false Chr2: 18666026-18666525 Arabidopsis thaliana
AT2G45270 0.5kb downstream 0.5kb downstream 3848 true Chr2: 18666526-18670373 Arabidopsis thaliana
AT2G45270 0.5kb downstream 0.5kb downstream 500 false Chr2: 18669874-18670373 Arabidopsis thaliana
AT2G45270 1.0kb upstream 1.0kb upstream 4348 true Chr2: 18665526-18669873 Arabidopsis thaliana
AT2G45270 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18665526-18666525 Arabidopsis thaliana
AT2G45270 1.0kb downstream 1.0kb downstream 4348 true Chr2: 18666526-18670873 Arabidopsis thaliana
AT2G45270 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18669874-18670873 Arabidopsis thaliana
AT2G45270 2.0kb upstream 2.0kb upstream 5348 true Chr2: 18664526-18669873 Arabidopsis thaliana
AT2G45270 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18664526-18666525 Arabidopsis thaliana
AT2G45270 2.0kb downstream 2.0kb downstream 5348 true Chr2: 18666526-18671873 Arabidopsis thaliana
AT2G45270 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18669874-18671873 Arabidopsis thaliana
AT2G45270 5.0kb upstream 5.0kb upstream 8348 true Chr2: 18661526-18669873 Arabidopsis thaliana
AT2G45270 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18661526-18666525 Arabidopsis thaliana
AT2G45270 5.0kb downstream 5.0kb downstream 8348 true Chr2: 18666526-18674873 Arabidopsis thaliana
AT2G45270 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18669874-18674873 Arabidopsis thaliana
AT2G45270 10.0kb upstream 10.0kb upstream 13348 true Chr2: 18656526-18669873 Arabidopsis thaliana
AT2G45270 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18656526-18666525 Arabidopsis thaliana
AT2G45270 10.0kb downstream 10.0kb downstream 13348 true Chr2: 18666526-18679873 Arabidopsis thaliana
AT2G45270 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18669874-18679873 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375853 5261 Brassicaceae View MSA
123832586 5264 Brassicales-Malvales View MSA
124350646 5266 SBM View MSA
124246525 5268 Malvidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.623        
cufflinks 2.584        
cufflinks 6.474        
cufflinks 2.837        
cufflinks 5.903        
cufflinks 2.206       Low

0 Strain