Gene : CCD7 A. thaliana TAIR10
Primary Identifier:  ? AT2G44990 Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase
Genomic Order:  3916 Name:  ? AT2G44990
Secondary Identifier:  ? PAC:19642922
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7101 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44990 0.5kb upstream 0.5kb upstream 3184 true Chr2: 18558438-18561621 Arabidopsis thaliana
AT2G44990 0.5kb upstream 0.5kb upstream 500 false Chr2: 18558438-18558937 Arabidopsis thaliana
AT2G44990 0.5kb downstream 0.5kb downstream 3184 true Chr2: 18558938-18562121 Arabidopsis thaliana
AT2G44990 0.5kb downstream 0.5kb downstream 500 false Chr2: 18561622-18562121 Arabidopsis thaliana
AT2G44990 1.0kb upstream 1.0kb upstream 3684 true Chr2: 18557938-18561621 Arabidopsis thaliana
AT2G44990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18557938-18558937 Arabidopsis thaliana
AT2G44990 1.0kb downstream 1.0kb downstream 3684 true Chr2: 18558938-18562621 Arabidopsis thaliana
AT2G44990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18561622-18562621 Arabidopsis thaliana
AT2G44990 2.0kb upstream 2.0kb upstream 4684 true Chr2: 18556938-18561621 Arabidopsis thaliana
AT2G44990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18556938-18558937 Arabidopsis thaliana
AT2G44990 2.0kb downstream 2.0kb downstream 4684 true Chr2: 18558938-18563621 Arabidopsis thaliana
AT2G44990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18561622-18563621 Arabidopsis thaliana
AT2G44990 5.0kb upstream 5.0kb upstream 7684 true Chr2: 18553938-18561621 Arabidopsis thaliana
AT2G44990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18553938-18558937 Arabidopsis thaliana
AT2G44990 5.0kb downstream 5.0kb downstream 7684 true Chr2: 18558938-18566621 Arabidopsis thaliana
AT2G44990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18561622-18566621 Arabidopsis thaliana
AT2G44990 10.0kb upstream 10.0kb upstream 12684 true Chr2: 18548938-18561621 Arabidopsis thaliana
AT2G44990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18548938-18558937 Arabidopsis thaliana
AT2G44990 10.0kb downstream 10.0kb downstream 12684 true Chr2: 18558938-18571621 Arabidopsis thaliana
AT2G44990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18561622-18571621 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364004 5261 Brassicaceae View MSA
123829529 5264 Brassicales-Malvales View MSA
124346337 5266 SBM View MSA
124240991 5268 Malvidae View MSA
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.075     Low Low
cufflinks 0.649        
cufflinks 0.107     Low  
cufflinks 0.451        
cufflinks 0.198     Low  
cufflinks 1.525       High

0 Strain