Gene : AT2G44820 A. thaliana TAIR10
Defline:  (1 of 1) PF15375 - Domain of unknown function (DUF4602) (DUF4602) Genomic Order:  3899
Name:  ? AT2G44820 Secondary Identifier:  ? PAC:19643117
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44820 0.5kb upstream 0.5kb upstream 1966 true Chr2: 18483851-18485816 Arabidopsis thaliana
AT2G44820 0.5kb upstream 0.5kb upstream 500 false Chr2: 18483851-18484350 Arabidopsis thaliana
AT2G44820 0.5kb downstream 0.5kb downstream 1966 true Chr2: 18484351-18486316 Arabidopsis thaliana
AT2G44820 0.5kb downstream 0.5kb downstream 500 false Chr2: 18485817-18486316 Arabidopsis thaliana
AT2G44820 1.0kb upstream 1.0kb upstream 2466 true Chr2: 18483351-18485816 Arabidopsis thaliana
AT2G44820 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18483351-18484350 Arabidopsis thaliana
AT2G44820 1.0kb downstream 1.0kb downstream 2466 true Chr2: 18484351-18486816 Arabidopsis thaliana
AT2G44820 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18485817-18486816 Arabidopsis thaliana
AT2G44820 2.0kb upstream 2.0kb upstream 3466 true Chr2: 18482351-18485816 Arabidopsis thaliana
AT2G44820 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18482351-18484350 Arabidopsis thaliana
AT2G44820 2.0kb downstream 2.0kb downstream 3466 true Chr2: 18484351-18487816 Arabidopsis thaliana
AT2G44820 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18485817-18487816 Arabidopsis thaliana
AT2G44820 5.0kb upstream 5.0kb upstream 6466 true Chr2: 18479351-18485816 Arabidopsis thaliana
AT2G44820 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18479351-18484350 Arabidopsis thaliana
AT2G44820 5.0kb downstream 5.0kb downstream 6466 true Chr2: 18484351-18490816 Arabidopsis thaliana
AT2G44820 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18485817-18490816 Arabidopsis thaliana
AT2G44820 10.0kb upstream 10.0kb upstream 11466 true Chr2: 18474351-18485816 Arabidopsis thaliana
AT2G44820 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18474351-18484350 Arabidopsis thaliana
AT2G44820 10.0kb downstream 10.0kb downstream 11466 true Chr2: 18484351-18495816 Arabidopsis thaliana
AT2G44820 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18485817-18495816 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360498 5261 Brassicaceae View MSA
123835694 5264 Brassicales-Malvales View MSA
124336570 5266 SBM View MSA
124250292 5268 Malvidae View MSA
124062220 5270 Rosid View MSA
123746193 5271 Pentapetalae View MSA
122791753 5272 Eudicot View MSA
122045698 5273 Angiosperm View MSA
121344425 5274 Embryophyte View MSA
123427686 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.011        
cufflinks 8.549        
cufflinks 6.534        
cufflinks 8.712        
cufflinks 5.225       Low
cufflinks 8.586        

0 Strain