Gene : cycp3;1 A. thaliana TAIR10
Primary Identifier:  ? AT2G45080 Defline:  (1 of 2) PTHR15615:SF15 - CYCLIN-U2-1-RELATED
Genomic Order:  3924 Name:  ? AT2G45080
Secondary Identifier:  ? PAC:19642409
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45080 0.5kb upstream 0.5kb upstream 1291 true Chr2: 18591165-18592455 Arabidopsis thaliana
AT2G45080 0.5kb upstream 0.5kb upstream 500 false Chr2: 18591165-18591664 Arabidopsis thaliana
AT2G45080 0.5kb downstream 0.5kb downstream 1291 true Chr2: 18591665-18592955 Arabidopsis thaliana
AT2G45080 0.5kb downstream 0.5kb downstream 500 false Chr2: 18592456-18592955 Arabidopsis thaliana
AT2G45080 1.0kb upstream 1.0kb upstream 1791 true Chr2: 18590665-18592455 Arabidopsis thaliana
AT2G45080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18590665-18591664 Arabidopsis thaliana
AT2G45080 1.0kb downstream 1.0kb downstream 1791 true Chr2: 18591665-18593455 Arabidopsis thaliana
AT2G45080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18592456-18593455 Arabidopsis thaliana
AT2G45080 2.0kb upstream 2.0kb upstream 2791 true Chr2: 18589665-18592455 Arabidopsis thaliana
AT2G45080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18589665-18591664 Arabidopsis thaliana
AT2G45080 2.0kb downstream 2.0kb downstream 2791 true Chr2: 18591665-18594455 Arabidopsis thaliana
AT2G45080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18592456-18594455 Arabidopsis thaliana
AT2G45080 5.0kb upstream 5.0kb upstream 5791 true Chr2: 18586665-18592455 Arabidopsis thaliana
AT2G45080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18586665-18591664 Arabidopsis thaliana
AT2G45080 5.0kb downstream 5.0kb downstream 5791 true Chr2: 18591665-18597455 Arabidopsis thaliana
AT2G45080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18592456-18597455 Arabidopsis thaliana
AT2G45080 10.0kb upstream 10.0kb upstream 10791 true Chr2: 18581665-18592455 Arabidopsis thaliana
AT2G45080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18581665-18591664 Arabidopsis thaliana
AT2G45080 10.0kb downstream 10.0kb downstream 10791 true Chr2: 18591665-18602455 Arabidopsis thaliana
AT2G45080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18592456-18602455 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041371 5273 Angiosperm View MSA
122375604 5261 Brassicaceae View MSA
123836408 5264 Brassicales-Malvales View MSA
124338290 5266 SBM View MSA
124239122 5268 Malvidae View MSA
124067559 5270 Rosid View MSA
123748506 5271 Pentapetalae View MSA
122790350 5272 Eudicot View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.142        
cufflinks 14.386        
cufflinks 1.048       Low
cufflinks 13.436        
cufflinks 0.904       Low
cufflinks 10.824        

0 Strain